pass_args: Specifying QGIS geoalgorithm parameters the R way
In r-spatial/RQGIS: Integrating R with QGIS

Description Usage Arguments Details Value Note Author(s) Examples

The function lets the user specify QGIS geoalgorithm parameters as R named arguments or a a parameter-argument list. When omitting required parameters, defaults will be used if available as derived from get_args_man(). Additionally, the function checks thoroughly the user-provided parameters and arguments.

1 2	pass_args(alg, ..., params = NULL, NA_flag = -99999, qgis_env = set_env())

`alg`	The name of the geoalgorithm to use.
`...`	Triple dots can be used to specify QGIS geoalgorithm arguments as R named arguments.
`params`	Parameter-argument list for a specific geoalgorithm, see `get_args_man()` for more details. Please note that you can either specify R arguments directly via the triple dots (see above) or via the parameter-argument list. However, you may not mix the two methods.
`NA_flag`	Value used for NAs when exporting raster objects through `save_spatial_objects()` (default: -99999).
`qgis_env`	Environment containing all the paths to run the QGIS API. For more information, refer to `set_env()`.

In detail, the function performs following actions and parameter-argument checks:

Were the right parameter names used?
Were the correct argument values provided?
The function collects all necessary arguments (to run QGIS) and respective default values which were not set by the user with the help of get_args_man().
If an argument value corresponds to a spatial object residing in R (sp-, sf- or raster-objects are supported), the function will save the spatial object to tempdir(), and use the corresponding file path to replace the spatial object in the parameter-argument list. If the QGIS geoalgorithm parameter belongs to the ParameterMultipleInput-instance class (see for example get_usage(grass7:v.patch)) you may either use a character-string containing the paths to the spatial objects separated by a semi-colon (e.g., "shape1.shp;shape2.shp;shape3.shp" - see also QGIS documentation) or provide a base::list() where each spatial object corresponds to one list element.
If a parameter accepts as arguments values from a selection, the function replaces verbal input by the corresponding number (required by the QGIS Python API). Please refer to the example section for more details, and to get_options() for valid options for a given geoalgorithm.
If GRASS_REGION_PARAMETER is "None" (the QGIS default), run_qgis will automatically determine the region extent based on the user-specified input layers. If you do want to specify the GRASS_REGION_PARAMETER yourself, please do it in accordance with the QGIS documentation, i.e., use a character string and separate the coordinates with a comma: "xmin, xmax, ymin, ymax".

The function returns the complete parameter-argument list for a given QGIS geoalgorithm. The list is constructed with the help of get_args_man() while considering the R named arguments or the params-parameter specified by the user as additional input. If available, the function returns the default values for all parameters which were not specified.

This function was inspired by rgrass7::doGRASS().

Jannes Muenchow

## Not run: 
data(dem, package = "RQGIS")
alg <- "grass7:r.slope.aspect"
get_usage(alg)
# 1. using R named arguments
pass_args(alg, elevation = dem, slope = "slope.asc")
# 2. doing the same with a parameter argument list
pass_args(alg, params = list(elevation = dem, slope = "slope.asc"))
# 3. verbal input replacement (note that "degrees" will be replaced by 0)
get_options(alg)
pass_args(alg, elevation = dem, format = "degrees")

## End(Not run)