Files in rachelwarnock/fossilsim
Simulation of Fossil and Taxonomy Data
.Rbuildignore
.gitignore
DESCRIPTION
FossilSim.Rproj
NAMESPACE
NEWS.md
R/BEAST.output.R
R/FossilSim.R
R/SAtree.R
R/conversions.R
R/fossils.R
R/plot.asymmetric.tree.R
R/plot.fossils.R
R/plot.taxonomy.R
R/reconcile.fossils.taxonomy.R
R/sim.fbd.R
R/sim.fossils.R
R/sim.interval.ages.R
R/sim.taxonomy.R
R/sim.tip.sampling.R
R/sim.trait.values.R
R/subsampling.R
R/taxonomy.R
R/utils.R
README.md
cran-comments.md
inst/WORDLIST
man/FossilSim.Rd
man/SAtree.Rd
man/SAtree.from.fossils.Rd
man/beast.fbd.format.Rd
man/count.fossils.Rd
man/count.fossils.binned.Rd
man/fossils.Rd
man/fossils.to.BEAST.constraints.Rd
man/fossils.to.BEAST.start.tree.Rd
man/fossils.to.paleotree.record.Rd
man/fossils.to.pyrate.Rd
man/get.tip.descs.Rd
man/paleotree.record.to.fossils.Rd
man/place.fossils.Rd
man/plot.fossils.Rd
man/plot.taxonomy.Rd
man/prune.fossil.tips.Rd
man/prune.fossils.Rd
man/rangeplot.asymmetric.Rd
man/reconcile.fossils.taxonomy.Rd
man/reconstructed.tree.fossils.objects.Rd
man/remove.stem.fossils.Rd
man/remove.stem.lineages.Rd
man/sampled.tree.from.combined.Rd
man/sim.anagenetic.species.Rd
man/sim.cryptic.species.Rd
man/sim.extant.samples.Rd
man/sim.fbd.age.Rd
man/sim.fbd.rateshift.taxa.Rd
man/sim.fbd.taxa.Rd
man/sim.fossils.environment.Rd
man/sim.fossils.intervals.Rd
man/sim.fossils.poisson.Rd
man/sim.gradient.Rd
man/sim.interval.ages.Rd
man/sim.taxonomy.Rd
man/sim.tip.samples.Rd
man/sim.trait.values.Rd
man/species.end.Rd
man/species.start.Rd
man/subsample.fossils.oldest.Rd
man/subsample.fossils.oldest.and.youngest.Rd
man/subsample.fossils.uniform.Rd
man/subsample.fossils.youngest.Rd
man/summary.taxonomy.Rd
man/taxonomy.Rd
man/tree.max.Rd
vignettes/SAtree.Rmd
vignettes/SAtree.html
vignettes/bibliography.bib
vignettes/fossils.Rmd
vignettes/fossils.html
vignettes/intro.Rmd
vignettes/intro.html
vignettes/mee.csl
vignettes/paleotree.Rmd
vignettes/paleotree.html
vignettes/simfbd.Rmd
vignettes/simfbd.html
vignettes/speciation_types.jpg
vignettes/taxonomy.Rmd
vignettes/taxonomy.html
