get_id | R Documentation |
This function retrieves information about one or more Ensembl identifiers. Ensembl identifiers for which information is available are: genes, exons, transcripts and proteins.
get_id(id, verbose = FALSE, warnings = TRUE, progress_bar = TRUE)
id |
A character vector of Ensembl identifiers. Ensembl identifiers have
the form ENS[species prefix][feature type prefix][a unique eleven digit
number]. |
verbose |
Whether to be verbose about the http requests and respective responses' status. |
warnings |
Whether to show warnings. |
progress_bar |
Whether to show a progress bar. |
A tibble
of 9 variables:
id
Ensembl identifier.
id_latest
Ensembl identifier including the version suffix.
type
Entity type: gene ('Gene'
), exon ('Exon'
),
transcript ('Transcript'
), and protein ('Translation'
).
id_version
Ensembl identifier version, indicates how many times that entity has changed during its time in Ensembl.
release
Ensembl release version.
is_current
Is this the latest identifier for the represented entity.
genome_assembly_name
Code name of the genome assembly.
peptide
TODO
possible_replacement
TODO
get_id(c('ENSDARE00000830915', 'ENSG00000248378', 'ENSDART00000033574', 'ENSP00000000233'))
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