studies_tbl: Creates a studies table.

In ramiromagno/gwasrapidd: 'REST' 'API' Client for the 'NHGRI'-'EBI' 'GWAS' Catalog

Creates a studies table.

Description

Creates a studies table.

Usage

studies_tbl(
  study_id = character(),
  reported_trait = character(),
  initial_sample_size = character(),
  replication_sample_size = character(),
  gxe = logical(),
  gxg = logical(),
  snp_count = integer(),
  qualifier = character(),
  imputed = logical(),
  pooled = logical(),
  study_design_comment = character(),
  full_pvalue_set = logical(),
  user_requested = logical()
)

Arguments

study_id	GWAS Catalog study accession identifier.
reported_trait	Phenotypic trait as reported by the authors of the study.
initial_sample_size	Free text description of the initial cohort sample size.
replication_sample_size	Free text description of the replication cohort sample size.
gxe	Whether the study investigates a gene-environment interaction.
gxg	Whether the study investigates a gene-gene interaction.
snp_count	Number of variants passing quality control.
qualifier	Qualifier of number of variants passing quality control.
imputed	Whether variants were imputed.
pooled	Whether samples were pooled.
study_design_comment	Any other relevant study design information.
full_pvalue_set	Whether full summary statistics are available for this study.
user_requested	Whether the addition of this study to the GWAS Catalog was requested by a user.

Value

A tibble whose columns are the named arguments to the function.

ramiromagno/gwasrapidd documentation built on Jan. 3, 2024, 10:21 p.m.