probe.liver: Gene position data frame

In raphg/iBMQ: integrated Bayesian Modeling of eQTL data

Description

A data frame specifying the genomic locations of each gene/probe needs to be prepared with the following columns: gene name, chromosome number, start location (in base pairs) and the location (in base pairs).

Usage

data(probe.liver)

Format

A data frame with 4427 observations with the following columns: gene name, chromosome number, start location (in base pairs) and the location (in base pairs).

Source

This F2 cross data set containing genotypic and phenotypic information for 60 mice was obtained from the lab of Alan Attie Lab at the University of Wisconsin-Madison. These data are also available at GEO (accession number GSE3330). Only the 5000 most variable expression traits out of 45,265 transcripts from the liver were used for the current example.

Examples

data(probe.liver)

raphg/iBMQ documentation built on May 26, 2019, 11:06 p.m.