Files in rcastelo/GenomicScores
Infrastructure to work with genomewide position-specific scores

DESCRIPTION
NAMESPACE
NEWS
R/AllClasses.R R/AllGeneric.R R/getGScores.R R/makeGScoresPackage.R R/methods-GScores.R README.md
inst/CITATION
inst/extdata/avgs.rds
inst/extdata/cadd.v1.3.hg19.chr22.rds
inst/extdata/mcap.v1.0.hg19.chr22.rds
inst/extdata/metadata_CADD.v1.3.hg19.csv
inst/extdata/metadata_MCAP.v1.0.hg19.csv
inst/extdata/metadata_fitCons.UCSC.hg19.csv
inst/extdata/metadata_linsight.UCSC.hg19.csv
inst/extdata/metadata_phastCons100way.UCSC.hg19.csv
inst/extdata/metadata_phastCons100way.UCSC.hg38.csv
inst/extdata/metadata_phastCons27way.UCSC.dm6.csv
inst/extdata/metadata_phastCons46wayPlacental.UCSC.hg19.csv
inst/extdata/metadata_phastCons46wayPrimates.UCSC.hg19.csv
inst/extdata/metadata_phastCons60way.UCSC.mm10.csv
inst/extdata/metadata_phastCons7way.UCSC.hg38.csv
inst/extdata/metadata_phyloP100way.UCSC.hg19.csv
inst/extdata/metadata_phyloP100way.UCSC.hg38.csv
inst/extdata/metadata_phyloP60way.UCSC.mm10.csv
inst/extdata/origphastCons100wayhg193UTR.rds
inst/extdata/origphastCons100wayhg19CDS.rds
inst/gscores-template/DESCRIPTION
inst/gscores-template/NAMESPACE
inst/gscores-template/R/zzz.R
inst/gscores-template/inst/extdata/.gitkeep
inst/gscores-template/man/package.Rd
inst/scripts/make-data_CADD.v1.3.hg19.R inst/scripts/make-data_MCAP.v1.0.hg19.R inst/scripts/make-data_MafDb.1Kgenomes.phase1.GRCh38.R inst/scripts/make-data_MafDb.1Kgenomes.phase1.hs37d5.R inst/scripts/make-data_MafDb.1Kgenomes.phase3.GRCh38.R inst/scripts/make-data_MafDb.1Kgenomes.phase3.hs37d5.R inst/scripts/make-data_MafDb.ESP6500SI.V2.SSA137.GRCh38.R inst/scripts/make-data_MafDb.ESP6500SI.V2.SSA137.hs37d5.R inst/scripts/make-data_MafDb.ExAC.r1.0.GRCh38.R inst/scripts/make-data_MafDb.ExAC.r1.0.hs37d5.R inst/scripts/make-data_MafDb.ExAC.r1.0.nonTCGA.GRCh38.R inst/scripts/make-data_MafDb.ExAC.r1.0.nonTCGA.hs37d5.R inst/scripts/make-data_MafDb.TOPMed.freeze5.hg19.R inst/scripts/make-data_MafDb.TOPMed.freeze5.hg38.R inst/scripts/make-data_MafDb.gnomAD.r2.0.1.GRCh38.R inst/scripts/make-data_MafDb.gnomAD.r2.0.1.hs37d5.R inst/scripts/make-data_MafDb.gnomAD.r2.1.hs37d5.R inst/scripts/make-data_MafDb.gnomADex.r2.0.1.GRCh38.R inst/scripts/make-data_MafDb.gnomADex.r2.0.1.hs37d5.R inst/scripts/make-data_MafDb.gnomADex.r2.1.hs37d5.R inst/scripts/make-data_fitCons.UCSC.hg19.R inst/scripts/make-data_linsight.UCSC.hg19.R inst/scripts/make-data_phastCons100way.UCSC.hg19.R inst/scripts/make-data_phastCons100way.UCSC.hg38.R inst/scripts/make-data_phastCons27way.UCSC.dm6.R inst/scripts/make-data_phastCons46wayPlacental.UCSC.hg19.R inst/scripts/make-data_phastCons46wayPrimates.UCSC.hg19.R inst/scripts/make-data_phastCons60way.UCSC.mm10.R inst/scripts/make-data_phastCons7way.UCSC.hg38.R inst/scripts/make-data_phyloP100way.UCSC.hg19.R inst/scripts/make-data_phyloP100way.UCSC.hg38.R inst/scripts/make-data_phyloP60way.UCSC.mm10.R inst/scripts/make-metadata_CADD.v1.3.hg19.R inst/scripts/make-metadata_MCAP.v1.0.hg19.R inst/scripts/make-metadata_fitCons.UCSC.hg19.R inst/scripts/make-metadata_linsight.UCSC.hg19.R inst/scripts/make-metadata_phastCons100way.UCSC.hg19.R inst/scripts/make-metadata_phastCons100way.UCSC.hg38.R inst/scripts/make-metadata_phastCons27way.UCSC.dm6.R inst/scripts/make-metadata_phastCons46wayPlacental.UCSC.hg19.R inst/scripts/make-metadata_phastCons46wayPrimates.UCSC.hg19.R inst/scripts/make-metadata_phastCons60way.UCSC.mm10.R inst/scripts/make-metadata_phastCons7way.UCSC.hg38.R inst/scripts/make-metadata_phyloP100way.UCSC.hg19.R inst/scripts/make-metadata_phyloP100way.UCSC.hg38.R inst/scripts/make-metadata_phyloP60way.UCSC.mm10.R man/GScores-class.Rd man/GenomicScores-defunct.Rd man/GenomicScores-deprecated.Rd man/MafDb-class.Rd man/gscores.Rd vignettes/GenomicScores.Rmd
vignettes/bibliography.bib
rcastelo/GenomicScores documentation built on Oct. 30, 2018, 2:40 a.m.