GenomicScores-defunct: Defunct methods in package 'GenomicScores'

In rcastelo/GenomicScores: Infrastructure to work with genomewide position-specific scores

Defunct methods in package ‘GenomicScores’

Description

Defunct classes and methods in ‘GenomicScores’.

Details

The following classes are defunct; use the replacement indicated below:

• MafDb: The MafDb class has been replaced by the GScores-class class.

The following methods are defunct; use the replacement indicated below:

• scores(): The scores() method has been replaced by the gscores() and score() methods.

• mafByOverlaps(): The mafByOverlaps() method has been replaced by the gscores() and score() methods.

• mafById(): The mafById() method has been replaced by the gscores() and score() methods.

Author(s)

Robert Castelo <[e-mail]>

rcastelo/GenomicScores documentation built on Feb. 1, 2025, 11:46 p.m.