containsMutations: SLiM method containsMutations
In rdinnager/slimrlang: Write SLiM Population Genetics Simulation Scripts in R

Description Usage Arguments Details Value Copyright Author(s)

View source: R/slim_lang.R View source: R/slim_lang.R

Documentation for SLiM function containsMutations, which is a method of the SLiM class Genome. Note that the R function is a stub, it does not do anything in R (except bring up this documentation). It will only do anything useful when used inside a slim_block function further nested in a slim_script function call, where it will be translated into valid SLiM code as part of a full SLiM script.

Documentation for SLiM function containsMutations, which is a method of the SLiM class Individual. Note that the R function is a stub, it does not do anything in R (except bring up this documentation). It will only do anything useful when used inside a slim_block function further nested in a slim_script function call, where it will be translated into valid SLiM code as part of a full SLiM script.

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containsMutations(mutations)

containsMutations(mutations)

mutations

An object of type Mutation object. See details for description.

Returns a logical vector indicating whether each of the mutations in mutations is present in the genome; each element in the returned vector indicates whether the corresponding mutation is present (T) or absent (F). This method is provided for speed; it is much faster than the corresponding Eidos code.

Returns a logical vector indicating whether each of the mutations in mutations is present in the individual (in either of its genomes); each element in the returned vector indicates whether the corresponding mutation is present (T) or absent (F). This method is provided for speed; it is much faster than the corresponding Eidos code.

An object of type logical.

This is documentation for a function in the SLiM software, and has been reproduced from the official manual, which can be found here: http://benhaller.com/slim/SLiM_Manual.pdf. This documentation is Copyright © 2016–2020 Philipp Messer. All rights reserved. More information about SLiM can be found on the official website: https://messerlab.org/slim/

Benjamin C Haller (bhaller@benhaller.com) and Philipp W Messer (messer@cornell.edu)

rdinnager/slimrlang documentation built on June 20, 2020, 8:17 p.m.