apply_eln2017_rna: Apply ELN2017-RNA stratification

In rdocking/amlpmpsupport: Support Functions for AML PMP RNA-Seq Stratification Manuscript

Description

Apply ELN2017-RNA stratification

Usage

apply_eln2017_rna(
  sv_status,
  npm1,
  flt3_itd,
  flt3_itd_support,
  cebpa,
  tp53,
  runx1,
  asxl1,
  expression_outlier,
  debug = FALSE
)

Arguments

sv_status	Structural variant status
npm1	NPM1 status
flt3_itd	FLT3-ITD status
flt3_itd_support	FLT3-ITD support (high or low)
cebpa	CEBPA status
tp53	TP53 status
runx1	RUNX1 status
asxl1	ASXL1 status
expression_outlier	Expression outlier status
debug	Print debug output

Value

A dataframe containing the stratification category and rationale

rdocking/amlpmpsupport documentation built on Jan. 4, 2021, 7:09 a.m.