Man pages for ready4-dev/specific
Specify Models to Solve Inverse Problems
| add_prefd_predr_var_to_mdl_smry_ls | Add preferred predictor variable to model summary list |
| add_tfd_var_to_ds | Add transformed variable to dataset |
| add_utility_predn_to_ds | Add utility prediction to dataset |
| add_utl_predn_to_new_ds | Add utility prediction to new dataset |
| authorData-methods | Author and document datasets |
| author-methods | Author and save files |
| calculate_depnt_var_tfmn | Calculate dependent variable transformation |
| calculate_rmse | Calculate root mean square error |
| depict-methods | Depict (plot) features of a dataset |
| deprecated | Deprecated function |
| enhance-methods | Enhance a dataset by adding new elements |
| exhibit-methods | Exhibit features of a dataset by printing them to the R... |
| fit_ts_model_with_brm | Fit time series model with bayesian regression model |
| get_background_text | Get background text |
| get_brms_mdl | Get bayesian regression models model |
| get_cndt_mdls | Get candidate models |
| get_cndts_for_mxd_mdls | Get candidates for mixed models |
| get_conclusion_text | Get conclusion text |
| get_covar_ctgs | Get covariate categories |
| get_covars_by_ctg | Get covariates by category |
| get_hlth_utl_nm | Get health utility name |
| get_hlth_utl_stat | Get health utility statistic |
| get_link_from_tfmn | Get link from transformation |
| get_lngl_ttu_types | Get longitudinal transfer to utility algorithm types |
| get_mdl_cmprsns | Get model comparisons |
| get_mdls_with_signft_covars | Get models with significant covariates |
| get_mdl_type_from_nm | Get model type from name |
| get_nbr_of_predrs | Get number of predictors |
| get_nbr_of_predrs_by_ctg | Get number of predictors by category |
| get_nbr_of_scndry_analyses | Get number of secondary analyses |
| get_ordered_sngl_csnl_mdls | Get ordered single cross-sectional models |
| get_popl_descvs | Get population descriptives |
| get_predr_ctgs | Get predictor categories |
| get_predrs_by_ctg | Get predictors by category |
| get_prefd_mdl_predrs | Get preferred model predictors |
| get_random_intercept | Get random intercept |
| get_scndry_anlys_descs | Get secondary analysis descriptions |
| get_selected_mixed_mdls | Get selected mixed models |
| get_signft_covars | Get significant covariates |
| get_table_predn_mdl | Get table prediction model |
| investigate-methods | Investigate solutions to an inverse problem |
| knit_mdl_rprt | Knit model report |
| make_abstract_args_ls | Make abstract arguments list |
| make_all_mdl_types_smry_tbl | Make all model types summary table |
| make_analysis_core_params_ls | Make analysis core parameters list |
| make_analysis_ds_smry_ls | Make analysis dataset summary list |
| make_bl_fup_add_to_row_ls | Make baseline follow-up add to row list |
| make_brms_mdl_plt | Make bayesian regression models model plot |
| make_brms_mdl_print_ls | Make bayesian regression models model print list |
| make_brms_mdl_smry_tbl | Make bayesian regression models model summary table |
| make_cmpst_sctr_and_dnst_plt | Make composite scatter and density plot |
| make_cndt_predr_text | Make candidate predictor text |
| make_cohort_ls | Make cohort list |
| make_coi_text | Make conflict of interest text |
| make_correlation_text | Make correlation text |
| make_covariates_text | Make covariates text |
| make_covar_ttu_tbl_refs | Make covariate transfer to utility algorithm table references |
| make_covar_ttu_tbl_title | Make covariate transfer to utility algorithm table title |
| make_csnl_example_predrs | Make cross-sectional example predictors |
| make_cs_ts_ratios_tb | Make cross-section time series ratios tibble |
| make_data_availability_text | Make data availability text |
| make_dnst_and_sctr_plt_title | Make density and scatter plot title |
| make_ds_descvs_ls | Make dataset descriptives list |
| make_ds_smry_ls | Make dataset summary list |
| make_ethics_text | Make ethics text |
| make_fake_ts_data | Make fake time series data |
| make_folds_ls | Make folds list |
| make_funding_text | Make funding text |
| make_hlth_utl_and_predrs_ls | Make health utility and predictors list |
| make_incld_mdl_paths | Make included model paths |
| make_indpnt_predrs_lngl_tbls_ref | Make independent predictors longitudinal tables reference |
| make_indpnt_predrs_lngl_tbl_title | Make independent predictors longitudinal table title |
| make_inner_loop_mdl_smry | Make inner loop model summary |
| make_input_params | Make input parameters |
| make_knit_pars_ls | Make knit pars list |
| make_lngl_ttu_r2_text | Make longitudinal transfer to utility algorithm squared text |
| make_lngl_ttu_with_covars_text | Make longitudinal transfer to utility algorithm with... |
| make_maui_params_ls | Make multi-attribute utility instrument parameters list |
| make_mdl | Make model |
| make_mdl_coef_range_text | Make model coefficient range text |
| make_mdl_coef_ratio_ls | Make model coefficient ratio list |
| make_mdl_desc_lines | Make model description lines |
| make_mdl_nms_ls | Make model names list |
| make_mdls_ls | Make models list |
| make_mdl_smry_elmt_tbl | Make model summary element table |
| make_mdl_smry_ls | Make model summary list |
| make_mdls_smry_tbls_ls | Make models summary tables list |
| make_mdl_type_smry_tbl | Make model type summary table |
| make_ms_smry_tbls_ls | Make manuscript summary tables list |
| make_nbr_at_fup_text | Make number at follow-up text |
| make_nbr_included_text | Make number included text |
| make_new_specific_models | make new specific models Candidate models lookup table |
| make_new_specific_predictors | make new specific predictors Candidate predictors lookup... |
| make_paths_to_ms_smry_plts_ls | Make paths to manuscript summary plots list |
| make_plot_fn_and_args_ls | Make plot function and arguments list |
| make_predn_ds_with_one_predr | Make prediction dataset with one predictor |
| make_predr_ctgs_ls | Make predictor categories list |
| make_predrs_for_best_mdls | Make predictors for best models |
| make_predr_vals | Make predictor values |
| make_predr_vars_nms_ls | Make predictor variables names list |
| make_prefd_mdls_vec | Make preferred models vector |
| make_prmry_analysis_params_ls | Make primary analysis parameters list |
| make_psych_predrs_lup | Make psych predictors lookup table |
| make_random_forest_text | Make random forest text |
| make_ranked_predrs_ls | Make ranked predictors list |
| make_results_ls | Make results list |
| make_results_ls_spine | Make results list spine |
| make_scaling_fctr_dbl | Make scaling factor double vector |
| make_scaling_text | Make scaling text |
| make_scndry_anlys_params | Make secondary analysis parameters |
| make_scndry_anlys_text | Make secondary analysis text |
| make_selected_mdl_text | Make selected model text |
| make_shareable_mdl | Make shareable model |
| make_smry_of_brm_mdl | Make summary of bayesian regression model model |
| make_smry_of_mdl_outp | Make summary of model output |
| make_smry_of_ts_mdl_outp | Make summary of time series model output |
| make_sngl_mdl_smry_tb | Make single model summary tibble |
| make_study_descs_ls | Make study descriptions list |
| make_ten_folds_tbl_title | Make ten folds table title |
| make_ten_fold_text | Make ten fold text |
| make_tfd_sngl_predr_mdls_tb | Make transformed single predictor models tibble |
| make_tfmn_cmprsn_plt | Make transformation comparison plot |
| make_ttu_cs_ls | Make transfer to utility algorithm cross-section list |
| make_uid_rename_lup | Make unique identifier rename lookup table |
| make_unique_ls_elmt_idx_int | Make unique list element index integer vector |
| make_valid_params_ls_ls | Make valid parameters list list |
| make_within_between_ratios_text | Make within between ratios text |
| manufacture-methods | Manufacture a new object |
| mdl_types_lup | Model types lookup table |
| metamorphose-methods | Metamorphose data from one model module (or sub-module)... |
| pipe | Pipe operator |
| plot_auto_lm | Plot automatic linear model |
| plot_lnr_cmprsn | Plot linear comparison |
| plot_obsd_predd_dnst | Plot observed predicted density |
| plot_obsd_predd_sctr_cmprsn | Plot observed predicted scatter comparison |
| plot_sctr_plt_cmprsn | Plot scatter plot comparison |
| plt_types_lup | Model plot types lookup table |
| predict_from_shareable_mdl | Predict from shareable model |
| predict_shrble_betareg | Predict shareable betareg |
| predict_shrble_glm | Predict shareable generalised linear model |
| predict_shrble_lm | Predict shareable linear model |
| predict_uncnstrd_utl | Predict unconstrained utility |
| predict_vals | Predict values |
| print_all_plts_for_mdl_set | Print all plots for model set |
| print_cohort_table | Print cohort table |
| print_cors_tbl | Print correlations table |
| print_covar_ttu_tbls | Print covariate transfer to utility algorithm tables |
| print_indpnt_predrs_coefs_tbl | Print independent predictors coefficients table |
| print_indpnt_predrs_lngl_mdl_coefs | Print independent predictors longitudinal model coefficients |
| print_lngl_ttu_tbls | Print longitudinal transfer to utility algorithm tables |
| print_ten_folds_tbl | Print ten folds table |
| print_ts_mdl_plts | Print time series model plots |
| procure-methods | Procure items from a dataset |
| randomise_changes_in_fct_lvls | Randomise changes in factor vector levels |
| ratify-methods | Ratify that a dataset meets validity criteria |
| rename_from_nmd_vec | Rename from named vector |
| renew-methods | Renew values in a dataset |
| reorder_cndt_predrs_chr | Reorder candidate predictors character vector |
| rprt_lup | Report types lookup table |
| scramble_xx | Scramble output object of multiple potential types |
| share-methods | Share data via an online repository |
| SpecificConverter-class | SpecificConverter |
| SpecificFixed-class | SpecificFixed |
| SpecificInitiator-class | SpecificInitiator |
| SpecificMixed-class | SpecificMixed |
| specific_models | Candidate models lookup table |
| SpecificModels-class | SpecificModels |
| specific-package | specific: Specify Models to Solve Inverse Problems |
| SpecificParameters-class | SpecificParameters |
| specific_predictors | Candidate predictors lookup table |
| SpecificPredictors-class | SpecificPredictors |
| SpecificPrivate-class | SpecificPrivate |
| SpecificProject-class | SpecificProject |
| SpecificResults-class | SpecificResults |
| SpecificShareable-class | SpecificShareable |
| SpecificSynopsis-class | SpecificSynopsis |
| transform_chr_digit_pairs | Transform character vector digit pairs |
| transform_data_tb_for_cmprsn | Transform data tibble for comparison |
| transform_depnt_var_nm | Transform dependent variable name |
| transform_dict_with_rename_lup | Transform dictionary with rename lookup table |
| transform_ds_for_all_cmprsn_plts | Transform dataset for all comparison plots |
| transform_ds_for_mdlng | Transform dataset for modelling |
| transform_ds_to_predn_ds | Transform dataset to prediction dataset |
| transform_mdl_vars_with_clss | Transform model variables with classes |
| transform_names | Transform names |
| transform_nms_in_mdl_tbl | Transform names in model table |
| transform_params_ls_from_lup | Transform parameters list from lookup table |
| transform_params_ls_to_valid | Transform parameters list to valid |
| transform_paths_ls_for_scndry | Transform paths list for secondary |
| transform_predd_var_nm | Transform predicted variable name |
| transform_predr_nm_part_of_phrases | Transform predictor name part of phrases |
| transform_rprt_lup | Transform report lookup table |
| transform_tbls_for_covar_nms | Transform tables for covariate names |
| transform_tbls_for_csnl_mdls | Transform tables for cross-sectional models |
| transform_tbl_to_rnd_vars | Transform table to round variables |
| transform_tb_to_mdl_inp | Transform tibble to model input |
| transform_timepoint_vals | Transform timepoint values |
| transform_uid_var | Transform unique identifier variable |
| validate_specific_models | validate specific models Candidate models lookup table |
| validate_specific_predictors | validate specific predictors Candidate predictors lookup... |
| write_analyses | Write analyses |
| write_box_cox_tfmn | Write box cox transformation |
| write_mdl_cmprsn | Write model comparison |
| write_mdl_plts | Write model plots |
| write_mdl_smry_rprt | Write model summary report |
| write_mdls_to_dv | Write models to dataverse |
| write_mdls_with_covars_cmprsn | Write models with covariates comparison |
| write_mdl_type_covars_mdls | Write model type covariates models |
| write_mdl_type_multi_outps | Write model type multi outputs |
| write_mdl_type_sngl_outps | Write model type single outputs |
| write_new_outp_dir | Write new output directory |
| write_predr_and_covars_cmprsn | Write predictor and covariates comparison |
| write_predr_and_mdl_tstng_results | Write predictor and model testing results |
| write_predr_cmprsn_outps | Write predictor comparison outputs |
| write_scndry_analysis | Write secondary analysis |
| write_scndry_analysis_dir | Write secondary analysis directory |
| write_secondary_analyses | Write secondary analyses |
| write_shareable_dir | Write shareable directory |
| write_shareable_mdls | Write shareable models |
| write_shareable_mdls_to_dv | Write shareable models to dataverse |
| write_sngl_predr_multi_mdls_outps | Write single predictor multi models outputs |
| write_study_outp_ds | Write study output dataset |
| write_to_delete_ds_copies | Write to delete dataset copies |
| write_to_delete_mdl_fls | Write to delete model files |
| write_ts_mdl_plts | Write time series model plots |
| write_ts_mdls | Write time series models |
| write_ts_mdls_from_alg_outp | Write time series models from algorithm output |
