API for reichlab/ssr-influenza-competition
Runs state-space reconstruction for CDC flu challenge

Global functions
assemble_prediction_examples Source code
assemble_training_examples Source code
compute_kernel_values Source code
compute_lagged_obs_vecs Source code
compute_normalized_log_weights Source code
create_ssr_control Source code
create_ssr_control_default Source code
est_ssr_params_stepwise_crossval Source code
est_ssr_params_stepwise_crossval_one_potential_step Source code
get_default_kernel_fns Source code
get_dist_predictions_one_week Source code
get_inds_smallest_k Source code
get_kernel_fn_init_params Source code
get_prediction_season_week Source code
get_pt_predictions_one_week Source code
logspace_add Source code
logspace_sub Source code
logspace_sub_matrix_rows Source code
logspace_sum_matrix_rows Source code
mae Source code
mae_from_kernel_weights_and_centers Source code
make_competition_forecasts Source code
make_competition_forecasts_by_trajectory Source code
make_competition_forecasts_one_season_week Source code
make_competition_forecasts_one_season_week_by_trajectory Source code
mase Source code
mase_from_kernel_weights_and_centers Source code
periodic_kernel Source code
simulate_counts_by_week Source code
simulate_counts_by_week_by_trajectory Source code
simulate_from_weighted_kde Source code
simulate_from_weighted_kde_given_ind Source code
squared_exp_kernel Source code
ssr Source code
ssr_crossval_estimate_parameter_loss Source code
ssr_predict Source code
ssr_predict_dengue_one_week Source code
ssr_predict_given_lagged_obs Source code
transform_theta_list Source code
unvectorize_theta Source code
unvectorize_theta_one_kernel_fn Source code
validate_ssr_control Source code
vectorize_theta Source code
reichlab/ssr-influenza-competition documentation built on May 24, 2017, 10:47 p.m.