calculate_overlap | Calculates the overlap of two stochastic character state... |
get_conditional | Calculate conditional probability of character co-occurrence |
get_intersect | Calculating character overlap for two independent stochastic... |
get_marginal | Calculate the marginal probability of character occurrence. |
pagel_multi | Runs Pagel's correlation method for multiple trees. |
plot_correlation | Plots a conditional probability from correlate distribution... |
plot.pagel | Plots the results of a multi-tree Pagel correlation analysis. |
print.pagel | Prints the results of a multi-tree Pagel analysis. |
summarize_correlate | Creates a summary overview of a correlate analysis. |
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