hdf5.to.df: Convert NEON Eddy Covaraince Data From hdf5 to Data Frames

In rhlee12/Noble: Work With NEON Project Instrumented Data

Description

This function will extract a given dataset ('meas.name') from the nested hdf5 data structure, and convert it to a data frame. If a save location is specified, a csv of the data will also be saved.

Usage

hdf5.to.df(site, files, data.type, meas.name, var.name, bgn.month,
  end.month, time.agr, save.dir, overwrite = FALSE)

Arguments

site	Parameter of class character. The 4-letter NEON site code that the data is for.
meas.name	Parameter of class character. The name of the measurement in the hdf5 file to be extracted.
time.agr	What the time difference between sequence values should be, in minutes.
save.dir	Optional. If specified a CSV of the extracted data will be saved to the input directory.
hdf5.file	Parameter of class character. The path to the hdf5 file to convert.

Value

A data table of mesurements for the requested data product.

Author(s)

Robert Lee [e-mail]

rhlee12/Noble documentation built on May 31, 2019, 10:36 a.m.