venn_generator: A Venn diagram generator function

In riccardo-trozzo/BlissR: Package to analyse Bliss-seq data after BLISS-seq preprocessing pipeline

Description

This function allows you to plot venn diagrams choosing between plotting intersection of peaks of of genes

Usage

venn_generator(plot_dir = "plots", samples, by, ...)

Arguments

plot_dir	the directory in which you want the plots, default = "plots"
by	choose between "peaks" or "genes", peaks if you want to plot the venn of the overlapping peaks and genes if you want to plot the venn of the gene hits
...	select one ore more parameters from the annotation table, the venn plot will be restricted to the corresponding regions
peaks	a list of data frames of genomic coordinates of peaks

Examples

venn_generator(samples, by = "peaks", selection)

riccardo-trozzo/BlissR documentation built on Aug. 1, 2020, 12:23 a.m.