Description Usage Arguments Details Value Author(s) See Also Examples
Reads a "Bio-Argo" formatted file into an oce
argo
object.
1 | read.bioArgo(file, url = FALSE, cache = FALSE)
|
file |
local filename or connection from which to read data. In the case where the argument |
url |
logical indicating if the file should be obtained directly via download from the MBARI website. Will also check to see if there is a locally cached copy in the current working directory (see |
cache |
ignored if |
Reads the plain-text csv files obtained from http://www.mbari.org/science/upper-ocean-systems/chemical-sensor-group/floatviz/
An oce
argo
object, containing the extra data columns
corresponding to the biological data.
Clark Richards, Dan Kelley, Cara Wilson
read.argo
, as.argo
, and as.section
from the
oce
package
1 2 3 4 5 | d <- read.bioArgo(system.file("extdata", "5145HawaiiQc.txt", package="bioArgo"))
ds <- as.section(d)
par(mfrow=c(2, 1))
plot(d)
plot(ds, xtype='time', which='oxygen')
|
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