pbd_sim_checked: Checked and safer version of PBD::pbd_sim

In richelbilderbeek/becosys: Unified Interface To Phylogenetics Models Of Speciation

Description

Checked and safer version of PBD::pbd_sim

Usage

pbd_sim_checked(
  erg,
  eri,
  scr,
  sirg,
  siri,
  stem_age = NULL,
  crown_age = NULL,
  max_n_taxa = Inf,
  add_shortest_and_longest = FALSE
)

Arguments

erg	extinction rate of a good species
eri	extinction rate of an incipient species
scr	speciation completion rate
sirg	speciation initiation rate of a good species
siri	speciation initiation rate of an incipient species
stem_age	stem age. Set either the stem age or the crown age.
crown_age	crown age. Set either the stem age or the crown age.
max_n_taxa	maximum number of taxa. If this value is exceeded, the simulation is aborted and removed.
add_shortest_and_longest	Gives the output of the new samplemethods 'shortest' and 'longest'.

Value

the output of a PBD sim, as can be checked by check_pbd_sim_out

richelbilderbeek/becosys documentation built on Oct. 19, 2020, 9:20 a.m.