README.md

protein_sentence_finder

Find the amino acids that form a sentence

Has a TMH:

TALKKICKDARINGSWIMAFFIRMMIMICDIVINELYSACKTHRIVEHEAPNARRATEARDENTFANCINATINGEASINGSHELTER
PRACTICESMEARSTAGGERWAILSPECIFYRESEARCHCHEERYLEADSDEFINEGRATIFYINGLYFITSMILINGINTERVIEWSMACKREMIND
NESTPAINLESSLYPICKGYRATESTIFLECREATIVEWRAPSERVEAFFIRMATIVESIMPLIFYFAVEAIDESTEPPRETENDTILT
IDEALLYFANTASTICALLYSIMPLIFYTHINKSAILGLEEDETAILCRAWLSPILLLASHSEEHANGDRAGRESERVEFASCINATINGLY
SLEEPWISELYHAILFLAGVALIDATEPRESERVESNAREMAKEENCHANTRETREATSIMPLIFYINTERESTGETPRICKLIMP
NAMEIDYLLICMEANRAISECHARMINGLYPALATIALCLIPFLATTERIMPRESSIVELIFTTWISTLISTENPREFERESWAILCLASSIFY
GRATIFIESSAMPLESWIMWRIGGLESMILINGLYWITNESSSENSITIVERETAINSNARLAMPLYPREFERRINGCLAPTHRILLSTHRIFTYRETRIEVE
> predict_topology_from_sequence("IDEALLYFANTASTICALLYSIMPLIFYTHINKS")
[1] "0000000111111111111111111100000000"


richelbilderbeek/prosefi documentation built on Nov. 21, 2020, 3:31 a.m.