Description Usage Arguments Value Author(s) Examples
View source: R/fastas_to_phylos.R
Per FASTA file, one random phylogeny is created, with the same taxa names as that FASTA file. All phylogenies have the same crown age.
1 | fastas_to_phylos(fasta_filenames, crown_age)
|
fasta_filenames |
One or more FASTA filenames.
Use |
crown_age |
the crown age of the phylogeny |
a multiPhylo
with as much phylogenies
as there were FASTA filenames. Each phylogeny has
the same taxa names as its corresponding FASTA file.
All phylogenies have the same crown age.
Richèl J.C. Bilderbeek
1 2 3 4 5 6 7 8 9 10 | # Create two random phylogies, with
# - the same taxa names as the FASTA files
# - the desired crown age
fasta_filenames <- beautier::get_beautier_paths(
c("anthus_aco.fas")
)
initial_phylogenies <- fastas_to_phylos(
fasta_filenames,
crown_age = 15
)
|
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