API for richelbilderbeek/wiritttes
WIRITTE simulation
| Global functions | |
|---|---|
| a2i | Man page |
| add_alignments | Man page |
| add_pbd_output | Man page |
| add_pbd_output_iff_absent | Man page |
| add_posteriors | Man page |
| add_species_trees | Man page |
| alignment_to_beast_input_file | Man page |
| alignment_to_beast_posterior | Man page |
| are_identical_posteriors | Man page |
| are_identical_trees_posteriors | Man page |
| are_valid_files | Man page |
| convert_alignment_to_fasta | Man page |
| convert_phylogeny_to_alignment | Man page |
| create_parameter_files_article | Man page |
| create_parameter_files_timings | Man page |
| create_test_parameter_files | Man page |
| do_simulation | Man page |
| do_test_simulations | Man page |
| extract_age | Man page |
| extract_crown_age | Man page |
| extract_erg | Man page |
| extract_eri | Man page |
| extract_fixed_crown_age | Man page |
| extract_mutation_rate | Man page |
| extract_napst | Man page |
| extract_nppa | Man page |
| extract_nspp | Man page |
| extract_parameters | Man page |
| extract_scr | Man page |
| extract_seed | Man page |
| extract_sequence_length | Man page |
| extract_sirg | Man page |
| extract_siri | Man page |
| file_has_valid_parameters | Man page |
| find_beast_jar_path | Man page |
| find_path | Man page |
| find_paths | Man page |
| get_alignment | Man page |
| get_alignment_by_index | Man page |
| get_alignments | Man page |
| get_pbd_output | Man page |
| get_phylogeny_crown_age | Man page |
| get_posterior | Man page |
| get_posterior_by_index | Man page |
| get_posterior_tree | Man page |
| get_posteriors | Man page |
| get_species_tree_by_index | Man page |
| get_species_tree_oldest | Man page |
| get_species_tree_youngest | Man page |
| has_alignments | Man page |
| has_beast2 | Man page |
| has_species_trees | Man page |
| is_valid_file | Man page |
| nrbs | Man page |
| p2i | Man page |
| read_file | Man page |
| read_files | Man page |
| save_parameters_to_file | Man page |
| set_alignment | Man page |
| set_alignment_by_index | Man page |
| set_posterior | Man page |
| set_posterior_by_index | Man page |
| set_species_tree_by_index | Man page |
