Man pages for richrr/TransNetDemo
An Introduction to Transkingdom Network Analysis

Apply_sign_cutoffsSelect significant elements
Calc_bipartite_betweeness_centralityCalc_bipartite_betweeness_centrality
Calc_combinedCalc combined p value across expts.
Calc_corCalculate correlation between vectors
Calc_median_valCalculate median coefficient or fold change
Check_consistencyCheck consistent direction
Compare_groupsCompare groups
Correlation_in_groupCorrelation_in_group
Diff_abundanceCompare abundance between groups for an element
Get_shortest_pathsGet counts for all shortest paths between given nodes in a...
Get_template_matrixGet_template_matrix
Identify_subnetworksIdentify top subnetwork
Puc_compatible_networkCalculate network that satisfies the PUC criteria
richrr/TransNetDemo documentation built on May 25, 2017, 3:17 a.m.