DistalLungEpithelium: Gene expression matrix of DistalLungEpithelium dataset...

In rikenbit/scTGIF: Cell type annotation for unannotated single-cell RNA-Seq data

Gene expression matrix of DistalLungEpithelium dataset containing five cluster.

Description

A data frame with 3397 rows (genes) with following 80 columns (cells).

The data is downloaded as supplementary information of the distal lung epithelium paper (https://www.nature.com/articles/nature13173).

Low-expressed genes are filted.

All Gene ID is converted to Human Entrez Gene ID for applying the data to scTGIF.

Usage

data("DistalLungEpithelium")

Source

http://www.nature.com/nbt/journal/v33/n2/full/nbt.3102.html

References

Treutlein, B. et al. (2014) Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq. Nature 509, 371-375

Examples

data("DistalLungEpithelium")

rikenbit/scTGIF documentation built on Jan. 14, 2023, 4:18 a.m.