Description Usage Arguments Details Value
Compute prior score P(M) for a 'bvsresponse'. The prior is flat from 0 parents to k0 parents, then exponentially(lambda) decreaasing to kmax, at which point it becomes zero.
1 | mukherjeeBioinformaticsPrior(x, k0, kmax, lambda)
|
x |
A 'bvsresponse' object |
k0 |
The level below which the prior stops being flat |
kmax |
The level above which the prior is zero |
lambda |
The exponential decay parameter |
The prior originates in Mukherjee el al. (2009), and is equation (8) in section 3.1.3.
Mukherjee et al. Sparse combinatorial inference with an application in cancer biology. Bioinformatics (2009) vol. 25 (2) pp. 265
The prior score for the 'bvsresponse' x
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