API for rjbgoudie/structmcmc
Structural inference for Bayesian Networks and Variable Selection.

Global functions
.onLoad Man page
BNGibbsSampler Man page Source code
BNOrderSampler Man page Source code
BNSampler Man page Source code
BNSamplerBigFlips Man page Source code
BNSamplerGrzeg Man page Source code
BNSamplerMJ Man page Source code
BNSamplerPT Man page Source code
adjustPredictions Man page Source code
allBannedExceptPPNotBannedIfNotRequired Man page Source code
allDescendants Man page Source code
allNonDescendants Man page Source code
as.data.frame.epmx Man page Source code
as.grain Man page Source code
as.roc Man page Source code
as.roc.ep Man page Source code
as.roc.ep.list Man page Source code
as.roc.parental Man page Source code
as.roc.parental.list Man page Source code
as.which.bit.fast Source code
auroc Man page Source code
auroc.ep Man page Source code
auroc.ep.list Man page Source code
bayes Man page Source code
bayes.bn Man page Source code
bf Man page Source code
bf.bnpostmcmc Man page
bnpost Man page Source code
bnpostmcmc Man page Source code
bnpostmcmc.list Man page Source code
burnin Man page Source code Source code
burnin.sampler Man page Source code
checkForNonDuplicated Man page Source code
conductance Man page Source code
convertEPMatrixToColumns Man page Source code
cumep Man page Source code
cumep.bnpostmcmc.list Man page
cumep.samplers Man page Source code
cummean Man page Source code
cummean.matrix Man page Source code
cumtvd Man page Source code
cumtvd.list Man page Source code
dagGivenOrder Man page Source code
decim Man page Source code
defaultBanned Man page Source code
dotplot.ep Man page Source code
dotplot.ep.list Man page Source code
dotplot.gp Man page Source code
dotplot.gp.list Man page Source code
draw Man page Source code
drawPT Man page Source code
drawSamplesByStepCount Man page Source code
drawSamplesByTime Man page Source code
eachChangesChoicesForRequired Man page Source code
edgeIsFlippable Man page Source code
eht Man page Source code
eht.bnpost Man page Source code
ellisWong Source code
enforceForbiddenConstraint Man page Source code
entropy Man page Source code
entropy.bnpost Man page Source code
enumerateParentsTable Man page Source code
enumerateParentsTableNode Man page Source code
enumerateRest Source code
ep Man page Source code
ep.bnpost Man page Source code
ep.bnpostmcmc Man page Source code
ep.bnpostmcmc.list Man page Source code
ep.list Man page Source code
ep.parental.contingency Man page Source code
ep.parental.list Man page Source code
ep.sampler Man page Source code
ep.table Man page Source code
epmx Man page Source code
epmx.bnpostmcmc Man page Source code
epmx.bnpostmcmc.list Man page
epmx.sampler Man page Source code
epmx.samplers Man page Source code
epmxPlotInternal Man page Source code
eval.prior Man page Source code
exactposterior Man page Source code
fastid Man page Source code
fdfAsInt Man page Source code
gelman Man page Source code
gelman.samplers Man page Source code
getAllConsistentWithDAG Man page Source code
getBannedFromConstraint Man page Source code
getNewGraph Man page Source code
getNijkCounts Man page Source code
getPossibleParents Man page Source code
getRequiredFromConstraint Man page Source code
getRowsNeeded Source code
getRowsNotNeeded Source code
getRowsThatContain Man page Source code
gp Man page Source code
gp.bnpost Man page Source code
gp.bnpostmcmc Man page Source code
gp.bnpostmcmc.list Man page Source code
gp.list Man page Source code
gp.sampler Man page Source code
graphProbGivenOrder Man page Source code
hp Man page Source code
intAsFDF Man page Source code
internal-onload Man page
intersect2 Man page Source code
intersection Man page Source code
is.valid.hyp Man page Source code
is.valid.localPriors Man page Source code
is.valid.prior Man page Source code
isConsistentWithOrder Man page Source code
kronecker_delta Man page Source code
length.bnpostmcmc Man page Source code
length.sampler Man page Source code
levelplot.bnpostmcmc Man page
levelplot.ep Man page Source code
levelplot.ep.list Man page Source code
localLogScoreMultDir Man page Source code
localLogScoreNormal Man page Source code
localPartitionFunction Man page Source code
logNumMHNeighbours Man page Source code
logOrderLikelihood Man page Source code
logScoreMultDir Man page Source code
logScoreMultDir.bn Man page Source code
logScoreMultDir.bn.list Man page Source code
logScoreMultDir.bnpostmcmc Man page Source code
logScoreMultDirFUN Man page Source code
logScoreMultDirIncremental Man page Source code
logScoreMultDirOffline Man page Source code
logScoreMultDirPrepare Man page Source code
logScoreNormal Man page Source code
logScoreNormal.bn Man page Source code
logScoreNormal.bn.list Man page Source code
logScoreNormalFUN Man page Source code
logScoreNormalIncremental Man page Source code
logScoreNormalOffline Man page Source code
logScoreNormalPrepare Man page Source code
logsumexp Man page Source code
makeRowPredictions Man page Source code
map Man page Source code
map.bnpost Man page Source code
map.bnpostmcmc Man page Source code
map.sampler Man page Source code
marginalGivenIntervention Man page Source code
marginalGivenOthers Man page Source code
matrix2 Man page Source code
mcmcposterior Man page Source code
ml Man page Source code
ml.bn Man page Source code
mukherjeeBioinformaticsPrior Man page Source code
mwep Man page Source code
mwep.bnpostmcmc.list Man page
mwep.samplers Man page Source code
mwmean Man page Source code
mwmean.matrix Man page Source code
new_queue Man page Source code
new_stack Man page Source code
nonDescendants Man page Source code
numberDAGsGivenOrder Man page Source code
numberOrdersGivenDAG Source code
nunique Man page Source code
onLoad Source code
options.grid Man page Source code
orderFlipOperator Man page Source code
orderPriorUniform Source code
orderPriorUniformStructures Source code
package-structmcmc Man page
parentalFromEPThreshold Man page Source code
parentalToCPDAG Man page Source code
plot.bnpostmcmc Man page
plotTape Man page Source code
posterior Man page Source code
predict.bn Man page Source code
predictGivenNoParents Man page Source code
predictGivenParents Man page Source code
predictModelAverageNode Man page Source code
predictNode Man page Source code
prepareGPPlot Man page Source code
prepareLevelPlot Man page Source code
print.sampler Man page Source code
priorGraph Man page Source code
priorUniform Man page Source code
queryFinding Man page Source code
removeDuplicates Man page Source code
requireSomethingFromEachParent Man page Source code
residsNormal Man page Source code
residsNormalNode Man page Source code
residualsMultDir Man page Source code
residualsMultDirNode Man page Source code
rocplot Man page Source code
routesAddEdges Man page Source code
routesRemoveEdges Man page Source code
rowProbabiltiesToResponse Man page Source code
rowSums2 Man page Source code
sampleNode Man page Source code
samplePair Man page Source code
samplePair2 Man page Source code
sampleQuadruple Man page Source code
sampleQuintuple Man page Source code
sampleTriple Man page Source code
sampledEnough Source code
samplers Man page Source code
satisfiesConstraint Man page Source code
scoreBIC Man page Source code
scoreParents Man page Source code
scoreParentsTable Man page Source code
scoreParentsTableNode Man page Source code
setdiff3 Man page Source code
setdiff4 Source code
setdiff5 Source code
setupConstraint Man page Source code
shrinkep Man page Source code
splom.bnpostmcmc.list Man page
splom.epmx Man page Source code
square_error Man page Source code
statistics Man page Source code
statistics.sampler Man page Source code
steps Man page Source code
steps.sampler Man page Source code
structmcmc Man page
structmcmc-package Man page
summary.gp Man page Source code
summary.sampler Man page Source code
top Man page Source code
top.bnpost Man page Source code
top.bnpostmcmc Man page Source code
top.sampler Man page Source code
topScoringGraph Man page Source code
tp Man page Source code
tp.bnpost Man page Source code
transposeEdgeIsAddable Man page Source code
transposeEdgeIsRemovable Man page Source code
transposeEdgeIsTogglable Man page Source code
validStartEnd Man page Source code
whichGraphsNotNeighbours Man page Source code
whichNum Man page Source code
whichParentSetRows Man page Source code
xyplot.cumtvd Man page Source code
xyplot.cumtvd.list Man page Source code
xyplot.epmx Man page Source code
xyplot.gp Man page Source code
xyplot.gp.list Man page Source code
rjbgoudie/structmcmc documentation built on Aug. 14, 2018, 2:21 a.m.