API for rli012/Hapi
Inference of Chromosome-length Haplotypes using Genomic Data of Single Gamete Cells
| Global functions | |
|---|---|
| Hapi | Man page |
| Hapi-package | Man page |
| MPRFun | Source code |
| alleleDetermineFun | Source code |
| backward | Source code |
| base2num | Man page Source code |
| crossover | Man page |
| cvCountFun | Source code Source code |
| defineWindowFun | Source code |
| fastCorrectIdentityFun | Source code |
| filterErrorFun | Source code |
| flipFun | Source code |
| forward | Source code |
| gamete11 | Man page |
| gmt | Man page |
| hapInferFun | Source code |
| hapiAssemble | Man page Source code |
| hapiAssembleEnd | Man page Source code |
| hapiAutoPhase | Man page Source code |
| hapiBlockMPR | Man page Source code |
| hapiCVCluster | Man page Source code |
| hapiCVDistance | Man page Source code |
| hapiCVMap | Man page Source code |
| hapiCVResolution | Man page Source code |
| hapiFilterError | Man page Source code |
| hapiFrameSelection | Man page Source code |
| hapiGameteView | Man page Source code |
| hapiIdentifyCV | Man page Source code |
| hapiImupte | Man page Source code |
| hapiPhase | Man page Source code |
| headTailHapAssembly | Source code |
| hg19 | Man page |
| hmmCVCountFun | Source code |
| hmmCVFun | Source code |
| imptDetermineFun | Source code |
| imputationFun1 | Source code |
| imputationFun2 | Source code |
| imputationFun3 | Source code |
| initHMM | Source code |
| multipleNaAdjacentFun | Source code |
| naAdjacentFun | Source code |
| num2base | Man page Source code |
| pairwiseHapInferFun2 | Source code |
| pairwiseRefFun | Source code |
| realHMMCVFun | Source code |
| simHMM | Source code |
| switchPosFun.L2 | Source code |
| switchPosFun.R2 | Source code |
| viterbi | Source code |
| walkingFun | Source code |
