hapiPhase: Phase draft haplotypes by majority voting
In rli012/Hapi: Inference of Chromosome-length Haplotypes using Genomic Data of Single Gamete Cells
hapiPhase R Documentation
Phase draft haplotypes by majority voting
Description
Phase draft haplotypes by majority voting
Usage
hapiPhase(gmt)
Arguments
gmt
a dataframe of imputed genotype data of gamete cells
Value
a dataframe of inferred draft haplotypes
Author(s)
Ruidong Li
Examples
ref <- rep(0,500)
alt <- rep(1,500)
imputedFrame <- data.frame(gmt1=ref, gmt2=alt, gmt3=ref,
gmt4=ref, gmt5=c(alt[1:250], ref[251:500]),
stringsAsFactors = FALSE)
draftHap <- hapiPhase(gmt=imputedFrame)
rli012/Hapi documentation built on April 4, 2022, 8:39 p.m.
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| hapiPhase | R Documentation |
Phase draft haplotypes by majority voting
Description
Phase draft haplotypes by majority voting
Usage
hapiPhase(gmt)
Arguments
gmt |
a dataframe of imputed genotype data of gamete cells |
Value
a dataframe of inferred draft haplotypes
Author(s)
Ruidong Li
Examples
ref <- rep(0,500) alt <- rep(1,500) imputedFrame <- data.frame(gmt1=ref, gmt2=alt, gmt3=ref, gmt4=ref, gmt5=c(alt[1:250], ref[251:500]), stringsAsFactors = FALSE) draftHap <- hapiPhase(gmt=imputedFrame)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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