Man pages for rmflight/fmcorrelationbreastcaparp1
Functions for calculating the correlations in PARP1 nucleosome data in breast cancer cell lines
| average_value | weighted average by width |
| binned_function | calculate binned values |
| bootstrap_correlation | run bootstrapped correlation |
| bootstrap_odregress | boostrap orthogonal regression |
| convert_to_counted | convert to counted GRanges |
| correlate_non_zero | correlate non-zeros |
| cum_indices | cumulative indices |
| cut_2_value | cut names 2 value |
| find_non_zeros | find non-zeros |
| generate_quantile_indices | quantile index |
| get_chr | get chromosome |
| list_correlation | list correlation |
| rle_mean_nozero | calculate Rle mean without zeros |
| run_cum_quantiles | run adding quantiles |
| subsample_nonzeros | subsample non-zeros |
