run_cum_quantiles: run adding quantiles
In rmflight/fmcorrelationbreastcaparp1: Functions for calculating the correlations in PARP1 nucleosome data in breast cancer cell lines

Given a data set, generate the quantiles, the cum_indices, run the correlation, and return a data.frame for plotting and diagnostics.

1 2	run_cum_quantiles(x, n_quantile = 101, similarity = stats::cor, cut_loc = "left")

`x`	a two column data.frame
`n_quantile`	how many quantiles
`similarity`	what similarity function to use
`cut_loc`	which way to generate cut values on the data ("left", "right", "mid")

data.frame with the values, the corresponding cut value, and which cumulative indices generated it

rmflight/fmcorrelationbreastcaparp1 documentation built on May 27, 2019, 9:31 a.m.

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