Man pages for rmflight/metabolomicsUtilities
Provides useful functions for working with metabolomics data
| calculate_mode | calculate mode |
| check_feature_class | check class |
| class_from_feature | create class from features |
| create_value | create a value from mantissa and exponent |
| extract | extract parts of a value |
| hello | Hello, World! |
| import_emf_classifications | Import EMF Classifications |
| log_with_min | log-transform data |
| mu_add_annotations | add annotations |
| mu_apply_normalization | apply normalization |
| mu_calc_normalization | calculate sample normalization |
| mu_calculate_threshold | calculate imputed threshold |
| mu_cooccurence_distance | get cooccurence distance |
| mu_cooccurence_heatmap | create cooccurrence heatmap |
| mu_correlation_plot | create correlation plot |
| mu_emf_sum | calculate emf sums |
| mu_heatmap | create a heatmap |
| mu_normalize_emf | normalize emf |
| mu_numberc13 | get number of c13 incorporations |
| mu_peak_intensity | return all peak heights |
| mu_plot_up_down_classes | create an up-down plot of classes |
| mu_plot_up_down_length_db | up-down plot within a class |
| mu_ratio_emfSum | ratio sum |
| mu_ratio_m0 | ratio m0 |
| mu_summarize_up_down | summarize the up and down-changed |
| mz_to_iranges | mz ranges to IRanges |
| pipe | Pipe operator |
| ttest_matrix | matrix t-test |
| ttest_vector | t-test |
| vote_categories_classes | vote on categories and classes |
| voted_to_multiple | transform multiple to a single entry |
| vote_on_classifications | vote on classifications |
| within | Within ranges |
| xlsx_to_json | convert peaks |
