Files in rmsharp/animalr

Provides Useful Functions for the SNPRC Animal Database

.Rbuildignore

.gitignore

.travis.yml

DESCRIPTION

LICENSE

NAMESPACE

NEWS.Rmd NEWS.md R/add_arc_species_code.R R/add_birth_date.R R/add_death_date.R R/add_departure_date.R R/alias_id_to_snprc_id.R R/animalr.R R/create_age_location_sex_species_view.R R/delete_database_record_by_object_id.R R/delete_database_tbl.R R/delete_id_from_tbl.R R/delete_offspring_from_offspring_tbl.R R/disable_trigger.R R/enable_trigger.R R/get_average_number_of_cagemates.R R/get_common_name_for_arc_species_code.R R/get_common_name_for_genus.R R/get_common_name_for_species_code.R R/get_dams_with_infants.R R/get_direct_ancestors.R R/get_first_offspring.R R/get_id_str.R R/get_ids_having_specific_character.R R/get_nonproductive_animals.R R/get_object_ids_in_tbl.R R/get_object_ids_not_in_tbl.R R/get_procs.R R/get_rearing.R R/get_trigger_name.R R/is_database_tbl.R R/is_database_view.R R/update_ids_in_table_by_id.R README.Rmd README.md

animalr.Rproj

docs/404.html

docs/LICENSE-text.html

docs/authors.html

docs/bootstrap-toc.css

docs/bootstrap-toc.js

docs/docsearch.css

docs/docsearch.js

docs/index.html

docs/link.svg

docs/news/index.html

docs/pkgdown.css

docs/pkgdown.js

docs/pkgdown.yml

docs/reference/Xhalfaversary_insert.html

docs/reference/add_arc_species_code.html

docs/reference/add_birth_date.html

docs/reference/add_colony.html

docs/reference/add_common_name.html

docs/reference/add_death_date.html

docs/reference/add_departure_date.html

docs/reference/add_sex.html

docs/reference/alias_id_to_snprc_id.html

docs/reference/begin_tran.html

docs/reference/commit_tran.html

docs/reference/create_Xhalfaversary.html

docs/reference/create_age_location_sex_species_view.html

docs/reference/delete_database_record_by_object_id.html

docs/reference/delete_database_tbl.html

docs/reference/delete_id_from_tbl.html

docs/reference/delete_offspring_from_offspring_table.html

docs/reference/disable_trigger.html

docs/reference/drop_Xhalfaversary.html

docs/reference/enable_trigger.html

docs/reference/fill_halfaversary_tbl.html

docs/reference/get_age_dist.html

docs/reference/get_assignments_to_iacuc.html

docs/reference/get_audit_proc_df.html

docs/reference/get_audit_vitals_df.html

docs/reference/get_audit_weight_df.html

docs/reference/get_average_number_of_cagemates.html

docs/reference/get_births_in_iacuc.html

docs/reference/get_cagemates.html

docs/reference/get_charge_account_table.html

docs/reference/get_column_names.html

docs/reference/get_common_name_for_arc_species_codes.html

docs/reference/get_common_name_for_genus.html

docs/reference/get_common_name_for_species_code.html

docs/reference/get_dams_with_infants.html

docs/reference/get_direct_ancestors.html

docs/reference/get_dispositions_for_iacuc.html

docs/reference/get_female_exposed_to_male_days.html

docs/reference/get_first_offspring.html

docs/reference/get_id_active_IACUC.html

docs/reference/get_id_clinical_admit.html

docs/reference/get_id_str.html

docs/reference/get_ids_having_specific_char.html

docs/reference/get_location_on_date.html

docs/reference/get_maintenance_iacuc.html

docs/reference/get_max_age.html

docs/reference/get_non_productive_animals.html

docs/reference/get_number_of_cagemates.html

docs/reference/get_object_ids_in_tbl.html

docs/reference/get_object_ids_not_in_tbl.html

docs/reference/get_proc_df.html

docs/reference/get_rearing.html

docs/reference/get_relatives.html

docs/reference/get_siblings.html

docs/reference/get_table_names.html

docs/reference/get_table_names_w_id_col.html

docs/reference/get_table_w_col.html

docs/reference/get_tables_and_columns.html

docs/reference/get_tables_views_and_columns.html

docs/reference/get_tables_with_data.html

docs/reference/get_tran_count.html

docs/reference/get_trigger_name.html

docs/reference/get_vasectomized_males.html

docs/reference/get_view_names.html

docs/reference/get_vitals_df.html

docs/reference/get_weight_df.html

docs/reference/has_id_column.html

docs/reference/index.html

docs/reference/is_animal_alive.html

docs/reference/is_animal_id.html

docs/reference/is_bad_animal_id.html

docs/reference/is_database_tbl.html

docs/reference/is_database_view.html

docs/reference/is_location.html

docs/reference/is_primate_id.html

docs/reference/remove_housekeeping_columns.html

docs/reference/rollback_tran.html

docs/reference/row_exist.html

docs/reference/rows_with_id_in_table.html

docs/reference/update_ids_in_tables_by_id.html

installation.Rmd

man/.DS_Store

man/Xhalfaversary_insert.Rd man/add_arc_species_code.Rd man/add_birth_date.Rd man/add_colony.Rd man/add_common_name.Rd man/add_death_date.Rd man/add_departure_date.Rd man/add_sex.Rd man/alias_id_to_snprc_id.Rd man/begin_tran.Rd man/commit_tran.Rd man/create_Xhalfaversary.Rd man/create_age_location_sex_species_view.Rd man/delete_database_record_by_object_id.Rd man/delete_database_tbl.Rd man/delete_id_from_tbl.Rd man/delete_offspring_from_offspring_table.Rd man/disable_trigger.Rd man/drop_Xhalfaversary.Rd man/enable_trigger.Rd man/fill_halfaversary_tbl.Rd man/get_age_dist.Rd man/get_assignments_to_iacuc.Rd man/get_audit_proc_df.Rd man/get_audit_vitals_df.Rd man/get_audit_weight_df.Rd man/get_average_number_of_cagemates.Rd man/get_births_in_iacuc.Rd man/get_cagemates.Rd man/get_charge_account_table.Rd man/get_column_names.Rd man/get_common_name_for_arc_species_codes.Rd man/get_common_name_for_genus.Rd man/get_common_name_for_species_code.Rd man/get_dams_with_infants.Rd man/get_direct_ancestors.Rd man/get_dispositions_for_iacuc.Rd man/get_female_exposed_to_male_days.Rd man/get_first_offspring.Rd man/get_id_active_IACUC.Rd man/get_id_clinical_admit.Rd man/get_id_str.Rd man/get_ids_having_specific_char.Rd man/get_location_on_date.Rd man/get_maintenance_iacuc.Rd man/get_max_age.Rd man/get_non_productive_animals.Rd man/get_number_of_cagemates.Rd man/get_object_ids_in_tbl.Rd man/get_object_ids_not_in_tbl.Rd man/get_proc_df.Rd man/get_rearing.Rd man/get_relatives.Rd man/get_siblings.Rd man/get_table_names.Rd man/get_table_names_w_id_col.Rd man/get_table_w_col.Rd man/get_tables_and_columns.Rd man/get_tables_views_and_columns.Rd man/get_tables_with_data.Rd man/get_tran_count.Rd man/get_trigger_name.Rd man/get_vasectomized_males.Rd man/get_view_names.Rd man/get_vitals_df.Rd man/get_weight_df.Rd man/has_id_column.Rd man/is_animal_alive.Rd man/is_animal_id.Rd man/is_bad_animal_id.Rd man/is_database_tbl.Rd man/is_database_view.Rd man/is_location.Rd man/is_primate_id.Rd man/remove_housekeeping_columns.Rd man/rollback_tran.Rd man/row_exist.Rd man/rows_with_id_in_table.Rd man/update_ids_in_tables_by_id.Rd tests/testthat.R tests/testthat/test_get_rearing.R

rmsharp/animalr documentation built on March 10, 2021, 1:12 p.m.