read_pos: Reads a HOMER peak/position file.
In rmwthorne/rangr: Extended Functions For Manipulating GenomicRanges Objects
Description
Usage
Arguments
Value
View source: R/import_functions.R
Description
read_pos takes a HOMER peak file as input and tries to automatically find the columns that describe genomic ranges. It returns them as a GRanges object.
Usage
1
Arguments
file
A HOMER-formatted peak file (PeakID, chr, start, stop ...)
keep_all
If TRUE, will keep all metadata columns.
message
Include messages for column parsing?
Value
A GenomicRanges object
rmwthorne/rangr documentation built on May 7, 2019, 11:15 a.m.
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Description Usage Arguments Value
View source: R/import_functions.R
Description
read_pos takes a HOMER peak file as input and tries to automatically find the columns that describe genomic ranges. It returns them as a GRanges object.
Usage
1 |
Arguments
file |
A HOMER-formatted peak file (PeakID, chr, start, stop ...) |
keep_all |
If |
message |
Include messages for column parsing? |
Value
A GenomicRanges object
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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