get_vargenes: Generate variable gene list from marker matrix

In rnabioco/clustifyR: Classifier for Single-cell RNA-seq Using Cell Clusters

Generate variable gene list from marker matrix

Description

Variable gene list is required for clustify main function. This function parses variables genes from a matrix input.

Usage

get_vargenes(marker_mat)

Arguments

marker_mat

matrix or dataframe of candidate genes for each cluster

Value

vector of marker gene names

Examples

get_vargenes(cbmc_m)

rnabioco/clustifyR documentation built on Aug. 30, 2024, 8:16 a.m.