Description Usage Arguments Details Value See Also Examples
Calculate Fisher's test on number of intervals that are shared and unique
between two sets of x
and y
intervals.
1  bed_fisher(x, y, genome)

x 

y 

genome 

Interval statistics can be used in combination with
dplyr::group_by()
and dplyr::do()
to calculate
statistics for subsets of data. See vignette('intervalstats')
for
examples.
tbl_interval()
http://bedtools.readthedocs.org/en/latest/content/tools/fisher.html
Other interval statistics: bed_absdist
,
bed_jaccard
, bed_projection
,
bed_reldist
1 2 3 4 5 6  genome < read_genome(valr_example('hg19.chrom.sizes.gz'))
x < bed_random(genome, seed = 1010486)
y < bed_random(genome, seed = 9203911)
bed_fisher(x, y, genome)

Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.