Simplified lake model in R

add_noise | Add noise to boundary conditions |

calc_dens | Calculate water density from temperature |

configure_from_ler | Configure model with LakeEnsemblR data |

EnKF | wrapper for running EnKF |

get_drivers | matrix for holding driver data |

get_model_dates | retreive the model time steps based on start and stop dates... |

get_obs_error_matrix | observation error matrix, should be a square matrix where col... |

get_obs_id_matrix | Measurement operator matrix saying 1 if there is observation... |

get_obs_matrix | turn observation dataframe into matrix |

get_Y_vector | vector for holding states and parameters for updating |

initialize_Y | initialize Y vector with draws from distribution of obs |

kalman_filtering | Smoothing of time series |

run_model | Simple two-layer water temperature model |

run_npz_model | Simple two-layer water temperature, oxygen, phytoplankton,... |

run_oxygen_model | Simple two-layer water temperature and oxygen model |

run_temp_oxygen_forecast | Simple one-layer water temperature and oxygen model in... |

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