tcell_examples: Example networks based on T cell data

In robertness/bninfo: Queries and information theoritic operations on Bayesian networks.

Description

Example networks based on the T cell data. These are useful for inference related operations. Loading the data set presents a list of the following objects:

Usage

data(tcell_examples)

Format

A list of modeling results

Details

• net: the validated network

• net_fit: a fitted Bayesian network. Fit on raw data from the cd3cd28, cd3cd28icam2, b2camp, pma, subsets. Data was logged, centered, and discretized in the 3 levels prior to fitting.

• net_gauss: a fitten Gaussian Bayesian network. Fit on same data as net_fit. Data was first logged then standarized.

• averaging_tabu: model averaging results of Scutari's workflow, which uses tabu search and models interventions.

• averaging_hc: model averaging results of Scutari's workflow, which uses hill-climbing search and models interventions.

Source

http://www.sciencemag.org/content/308/5721/523.short

See Also

tcells

robertness/bninfo documentation built on May 27, 2019, 10:32 a.m.