| deleteOneOfTwoVertices | Given a choice of two vertices to remove, remove the vertex... |
| drawGraphWithInvariants | A graphing function for invariants. |
| getMinimalInvariants | Calculates minimimal invariants from a incidence matrix. |
| getOverlapEdges | Find overlapping p-invariants |
| getPetriNetMatrices | Converts a bipartite biochemical network graph into a matrix... |
| getReactionAncestors | When traversing a graph to remove reversable transactions,... |
| makeOneWay | Eliminating reversable reaction |
| parseBipartiteEdges | A data processing function for the raw Schoeberl data. Used... |
| PathFlow-package | What the package does (short line) ~~ package title ~~ |
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