mapk_g: KEGG MAPK Signaling Pathway Phosphorylation Network
In robertness/signalgraph: Signal Processing with Graphs
Description
Usage
Format
Details
Description
A network of all the phosphorylation edges pulled from the MAPK Signaling Pathway on KEGG.
Edges from the human map ("hsa") are pulled.
http://www.kegg.jp/kegg-bin/show_pathway?map=hsa04010&show_description=show
Usage
1
Format
An igraph object with 60 vertices and 76 edges. Vertex attributes include "label"
("MAP4K4", "PLA2G4B", "STMN1"...) and "kid" for KEGG ids ("hsa:9448", "hsa:100137049", "hsa:3925",...)
Details
The script for generating the graph is available here:
https://gist.github.com/robertness/ecb79071301924f43d09
robertness/signalgraph documentation built on May 27, 2019, 10:33 a.m.
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Description Usage Format Details
Description
A network of all the phosphorylation edges pulled from the MAPK Signaling Pathway on KEGG. Edges from the human map ("hsa") are pulled. http://www.kegg.jp/kegg-bin/show_pathway?map=hsa04010&show_description=show
Usage
1 |
Format
An igraph object with 60 vertices and 76 edges. Vertex attributes include "label" ("MAP4K4", "PLA2G4B", "STMN1"...) and "kid" for KEGG ids ("hsa:9448", "hsa:100137049", "hsa:3925",...)
Details
The script for generating the graph is available here: https://gist.github.com/robertness/ecb79071301924f43d09
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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