robinjugas/CNproScan: CNproScan detects and annotates CNVs in bacterial genomes.
CNproScan applies Generalized Extreme Studentized Deviate to detect outliers in the read-depth signal. It also analyses BAM file for discovering read pairs mapping discordancies, which are used for CNV annotation. See https://github.com/robinjugas/CNproScan
Getting started
Browse package contents
Package details |
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| Bioconductor views | CopyNumberVariation WholeGenome |
| Maintainer | |
| License | `use_mit_license()` |
| Version | 1.0 |
| URL | https://github.com/robinjugas/CNproScan/ |
| Package repository | View on GitHub |
| Installation |
Install the latest version of this package by entering the following in R:
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