Description Usage Arguments Details Value Examples
View source: R/speedestimates.R
Dispersal speed for deme fission model
1 2 | disp_rate_fission(r2, K, m, migration_type = 2,
migration_edge_only = 0, two_dim = TRUE, NumCells = NA)
|
r2 |
birth rate relative to reference birth rate |
K |
deme carrying capacity |
m |
migration rate per cell, relative to birth rate |
migration_type |
2 or 3 (see details) |
migration_edge_only |
whether migration occurs at the edge only |
two_dim |
whether to adjust for two-dimensional growth |
NumCells |
total population size (all demes); required only if migration_type = 2 or 3 and migration_edge_only = 0 |
Assumes that a deme cannot attempt fission until its population size reaches K.
Meaning of migration_type:
2: fission, such that a fission attempt occurs only following a birth event
3: fission, such that fission is independent of birth
The growth rate of the radius, measured in cells (not demes).
1 2 3 4 5 6 7 8 9 | disp_rate_fission(1, 2, 0.1, NumCells = 1e6)
disp_rate_fission(1, 2, 0.1, migration_type = 3, NumCells = 1e6)
# compare observed and predicted dispersal rates:
df <- combine_dfs(system.file("extdata", "", package = "demonanalysis", mustWork = TRUE),
include_diversities = FALSE)
rate_obs <- median(df$RadiusGrowthRate[which(df$NumCells > 400)])
rate_pred <- disp_rate_fission(1, 1, 1, migration_edge_only = 1)
rate_pred / rate_obs
|
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.