disp_rate_fission: Dispersal speed for deme fission model

Description Usage Arguments Details Value Examples

View source: R/speedestimates.R

Description

Dispersal speed for deme fission model

Usage

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disp_rate_fission(r2, K, m, migration_type = 2,
  migration_edge_only = 0, two_dim = TRUE, NumCells = NA)

Arguments

r2

birth rate relative to reference birth rate

K

deme carrying capacity

m

migration rate per cell, relative to birth rate

migration_type

2 or 3 (see details)

migration_edge_only

whether migration occurs at the edge only

two_dim

whether to adjust for two-dimensional growth

NumCells

total population size (all demes); required only if migration_type = 2 or 3 and migration_edge_only = 0

Details

Assumes that a deme cannot attempt fission until its population size reaches K.

Meaning of migration_type:

Value

The growth rate of the radius, measured in cells (not demes).

Examples

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disp_rate_fission(1, 2, 0.1, NumCells = 1e6)
disp_rate_fission(1, 2, 0.1, migration_type = 3, NumCells = 1e6)

# compare observed and predicted dispersal rates:
df <- combine_dfs(system.file("extdata", "", package = "demonanalysis", mustWork = TRUE), 
include_diversities = FALSE)
rate_obs <- median(df$RadiusGrowthRate[which(df$NumCells > 400)])
rate_pred <- disp_rate_fission(1, 1, 1, migration_edge_only = 1)
rate_pred / rate_obs

robjohnnoble/demonanalysis documentation built on June 30, 2020, 12:47 a.m.