MFCLRep-class: An S4 class : Model information from the rep file.

MFCLRep-classR Documentation

An S4 class : Model information from the rep file.

Description

An S4 class : Model information from the rep file.

Slots

fishery_realizations

Description

mean_laa

Mean length at age

mean_waa

Mean weight at age

sd_laa

Standard deviation of length at age

m_at_age

Natural mortality

sel

Selectivity

q_fishery

Description

q_effdev

Description

fm

Fishing mortality

fm_aggregated

Fishing mortality aggregated

popN

Population numbers

rec_region

Description

totalBiomass

Total biomass

totalBiomass_nofish

Description

adultBiomass

Description

adultBiomass_nofish

Description

vulnBiomass

Vulnerable biomass

srr

Description

eq_ssb

Equilibrium SSB

eq_ssb_obs

Description

eq_rec

Equilibrium recruitment

eq_rec_obs

Description

catch_obs

Observed catches

catch_pred

Predicted catches

cpue_obs

Observed CPUE

cpue_pred

Predicted CPUE

eq_biomass

Equilibrium biomass

eq_yield

Equilibrium yield

MSY

MSY

FMSY

Fmsy

BMSY

Bmsy

ABBMSY_ts

Description

FFMSY_ts

Description

ABBMSY

Description

TBBMSY

Description

Fmult

Description

AggregateF

Description


robscott3/FLR4MFCL documentation built on April 9, 2024, 3:31 p.m.