data.quality.report: Create the data quality report

In ropensci/cleanEHR: The Critical Care Clinical Data Processing Tools

Create the data quality report

Description

Create a detailed data quality report, including file summary, site summary, data completeness, and density plot. The result can be found in work_dir/report/data_quality_report.pdf/md. Using this function, one can also create a site/trust specified report, see the argument "site". You need to make sure that you have the right to write into the work_dir.

Usage

data.quality.report(ccd, site = NULL, file = NULL, pdf = TRUE,
  out = "report")

Arguments

ccd	ccRecord
site	a vector of the site ids for the site specified report.
file	character a list of XML file origins.
pdf	logical create the pdf version of the DQ report, otherwise stay in markdown format
out	character output path

Examples

## Not run: data.quality.report(ccd, c("Q70", "C90"))

ropensci/cleanEHR documentation built on Aug. 28, 2022, 8:31 p.m.