Files in ropensci/cleanEHR
The Critical Care Clinical Data Processing Tools
.Rbuildignore
.gitignore
.travis.yml
DESCRIPTION
LICENSE
Makefile
NAMESPACE
R/RcppExports.R
R/ccRecord.R
R/ccTable.R
R/cchic_xml.R
R/data.R
R/data.quality.report.R
R/deltaTime.R
R/demographics.R
R/filter.categorical.R
R/filter.missingness.R
R/filter.range.R
R/imputation.R
R/stdid.R
R/utilities.R
R/zzz.R
README-not.md
README.md
appveyor.yml
data/ITEM_REFTABLE.RData
data/icnarc_table.csv
data/sample_ccd.RData
inst/conf/ANALYSIS_REF.yaml
inst/conf/ITEM_REF.yaml
inst/conf/accept_completeness.yaml
inst/conf/icnarc_codes.csv
inst/report/bar.png
inst/report/ccd_color.png
inst/report/ccd_gray.png
inst/report/data_quality_report.Rmd
inst/report/listings-setup.tex
inst/report/report.latex
man/ITEM_REF.Rd
man/StdId.Rd
man/as.number.Rd
man/ccEpisode-class.Rd
man/ccRecord-class.Rd
man/ccTable-class.Rd
man/ccTable_apply_filters.Rd
man/ccTable_clean.Rd
man/ccTable_create_cctable.Rd
man/ccTable_export_csv.Rd
man/ccTable_filter_categories.Rd
man/ccTable_filter_missingness.Rd
man/ccTable_filter_nodata.Rd
man/ccTable_filter_range.Rd
man/ccTable_reload_conf.Rd
man/ccTable_reset.Rd
man/ccd.Rd
man/ccd_demographic_spell.Rd
man/ccd_demographic_table.Rd
man/ccd_select_table.Rd
man/ccd_unique_spell.Rd
man/code2stname.Rd
man/create2dclean.Rd
man/create_cctable.Rd
man/data.checklist.Rd
man/data.quality.report.Rd
man/data.quality.report.brc.Rd
man/deltaTime.Rd
man/demg.distribution.Rd
man/demographic.data.completeness.Rd
man/extract_file_origin.Rd
man/extract_info.Rd
man/file.summary.Rd
man/for_each_episode.Rd
man/getEpisodePeriod.Rd
man/getXmlepisode.Rd
man/icnarc2diagnosis.Rd
man/icnarc_table.Rd
man/inrange.Rd
man/is.demographic.Rd
man/is.drugs.Rd
man/is.laboratory.Rd
man/is.physiology.Rd
man/lenstay.Rd
man/long2stname.Rd
man/lookup.items.Rd
man/new.episode.Rd
man/physio.distribution.Rd
man/plot_episode-ccEpisode-character-method.Rd
man/plot_episode-ccEpisode-missing-method.Rd
man/plot_episode.Rd
man/plus-ccRecord-NULL-method.Rd
man/plus-ccRecord-ccEpisode-method.Rd
man/plus-ccRecord-ccRecord-method.Rd
man/plus-ccRecord-list-method.Rd
man/reallocateTimeRecord.Rd
man/samplerate2d.Rd
man/site.info.Rd
man/stname2code.Rd
man/stname2longname.Rd
man/sub-ccRecord-ANY-method.Rd
man/sub-ccRecord-character-method.Rd
man/sub-sub-ccRecord-method.Rd
man/table1.Rd
man/total.data.point.Rd
man/which.classification.Rd
man/whichIsCode.Rd
man/xml.file.duration.plot.Rd
man/xml.site.duration.plot.Rd
man/xml2Data.Rd
man/xmlLoad.Rd
man/xmlTime2POSIX.Rd
paper/graph/episode_graph.pdf
paper/graph/item_ref_time.png
paper/graph/range_filter.png
paper/paper.bib
paper/paper.md
src/Makevars
src/RcppExports.cpp
src/collapseTime.cpp
tests/data/ANALYSIS_REF.yaml
tests/data/break_into.sh
tests/data/check_config.yaml
tests/data/sample_ccd.RData
tests/data/test_2yml.yml
tests/data/test_aggregate_patients.xml
tests/data/test_analysis_ref.yaml
tests/data/test_data_anonym.xml
tests/data/test_sofa.yml
tests/data/test_spec.yml
tests/testthat.R
tests/testthat/test_0_load_xml.r
tests/testthat/test_ccdatatable.r
tests/testthat/test_create2dclean.r
tests/testthat/test_deltaTime.r
tests/testthat/test_demographics.r
tests/testthat/test_patientIndex.r
tests/testthat/test_range_filter.r
tests/testthat/test_reallocateTime.r
tests/testthat/test_record2.r
tests/testthat/test_report.r
tests/testthat/test_selectTable.r
tests/testthat/test_stdid.r
tests/testthat/test_utilities.r
tests/testthat/test_xml_data.r
vignettes/cchic_overview.Rmd
vignettes/cchic_timeline.png
vignettes/data_clean.Rmd
vignettes/item_ref.png
