R/odb.R

In ropensci/git2r: Provides Access to Git Repositories

## git2r, R bindings to the libgit2 library.
## Copyright (C) 2013-2018 The git2r contributors
##
## This program is free software; you can redistribute it and/or modify
## it under the terms of the GNU General Public License, version 2,
## as published by the Free Software Foundation.
##
## git2r is distributed in the hope that it will be useful,
## but WITHOUT ANY WARRANTY; without even the implied warranty of
## MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
## GNU General Public License for more details.
##
## You should have received a copy of the GNU General Public License along
## with this program; if not, write to the Free Software Foundation, Inc.,
## 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.

##' Blobs in the object database
##'
##' List all blobs reachable from the commits in the object
##' database. For each commit, list blob's in the commit tree and
##' sub-trees.
##' @template repo-param
##' @return A data.frame with the following columns:
##' \describe{
##'   \item{sha}{The sha of the blob}
##'   \item{path}{The path to the blob from the tree and sub-trees}
##'   \item{name}{The name of the blob from the tree that contains the blob}
##'   \item{len}{The length of the blob}
##'   \item{commit}{The sha of the commit}
##'   \item{author}{The author of the commit}
##'   \item{when}{The timestamp of the author signature in the commit}
##' }
##' @note A blob sha can have several entries
##' @export
##' @examples \dontrun{
##' ## Create a directory in tempdir
##' path <- tempfile(pattern="git2r-")
##' dir.create(path)
##'
##' ## Initialize a repository
##' repo <- init(path)
##' config(repo, user.name = "Alice", user.email = "alice@@example.org")
##'
##' ## Create a file, add and commit
##' lines <- "Lorem ipsum dolor sit amet, consectetur adipisicing elit, sed do"
##' writeLines(lines, file.path(path, "test.txt"))
##' add(repo, "test.txt")
##' commit(repo, "Commit message 1")
##'
##' ## Change file and commit
##' lines <- c(
##'   "Lorem ipsum dolor sit amet, consectetur adipisicing elit, sed do",
##'   "eiusmod tempor incididunt ut labore et dolore magna aliqua.")
##' writeLines(lines, file.path(path, "test.txt"))
##' add(repo, "test.txt")
##' commit(repo, "Commit message 2")
##'
##' ## Commit same content under different name in a sub-directory
##' dir.create(file.path(path, "sub-directory"))
##' file.copy(file.path(path, "test.txt"),
##'           file.path(path, "sub-directory", "copy.txt"))
##' add(repo, "sub-directory/copy.txt")
##' commit(repo, "Commit message 3")
##'
##' ## List blobs
##' odb_blobs(repo)
##' }
odb_blobs <- function(repo = ".") {
    blobs <- .Call(git2r_odb_blobs, lookup_repository(repo))
    blobs <- data.frame(blobs, stringsAsFactors = FALSE)
    blobs <- blobs[order(blobs$when), ]
    index <- paste0(blobs$sha, ":", blobs$path, "/", blobs$name)
    blobs <- blobs[!duplicated(index), ]
    rownames(blobs) <- NULL
    blobs$when <- as.POSIXct(blobs$when, origin = "1970-01-01", tz = "GMT")
    blobs
}

##' List all objects available in the database
##'
##' @template repo-param
##' @return A data.frame with the following columns:
##' \describe{
##'   \item{sha}{The sha of the object}
##'   \item{type}{The type of the object}
##'   \item{len}{The length of the object}
##' }
##' @export
##' @examples \dontrun{
##' ## Create a directory in tempdir
##' path <- tempfile(pattern="git2r-")
##' dir.create(path)
##'
##' ## Initialize a repository
##' repo <- init(path)
##' config(repo, user.name = "Alice", user.email = "alice@@example.org")
##'
##' ## Create a file, add and commit
##' lines <- "Lorem ipsum dolor sit amet, consectetur adipisicing elit, sed do"
##' writeLines(lines, file.path(path, "test.txt"))
##' add(repo, "test.txt")
##' commit(repo, "Commit message 1")
##'
##' ## Create tag
##' tag(repo, "Tagname", "Tag message")
##'
##' ## List objects in repository
##' odb_objects(repo)
##' }
odb_objects <- function(repo = ".") {
    data.frame(.Call(git2r_odb_objects, lookup_repository(repo)),
               stringsAsFactors = FALSE)
}