get_taxa | R Documentation |
Get taxon information from Neotoma.
get_taxa(taxonid, taxonname, status, taxagroup, ecolgroup)
taxonid |
Numeric taxon identifier used in Neotoma |
taxonname |
A character string representing the full or partial name of taxa of interest. |
status |
The current status of the taxon, one of 'extinct', 'extant', 'all'. |
taxagroup |
The taxonomic grouping for the taxa. See http://wnapi.neotomadb.org/doc/resources/taxa for the list of approved groupings. |
ecolgroup |
The ecological group of the taxa. More detailed than |
Returns a data frame with the following components:
|
Unique database record identifier for a taxon |
|
Shorthand notation for a taxon identification |
|
Name of the taxon |
|
Author(s) of the name. Used almost exclusively with beetle taxa |
|
True if extinct; false if extant |
|
Code for taxa group to which taxon belongs |
|
Array of ecological group codes to which the taxon belongs |
|
TaxonID of the next higher taxonomic rank |
|
Publication identification number |
|
Free-form notes or comments about the taxon |
Simon J. Goring simon.j.goring@gmail.com
Neotoma Project Website: http://www.neotomadb.org API Reference: http://wnapi.neotomadb.org/doc/resources/contacts
## Not run: ## Return all species taxa with "Abies" in name - note wildcard taxa <- get_taxa(taxonname = "Abies*") ## End(Not run)
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