Description Usage Arguments Value Examples
View source: R/parse_pubmed_xml.r
Note: this function assumes all records are of the type "PubmedArticle" and will return an empty record for any other type (including books).
1 |
record |
Either and XMLInternalDocument or character the record to be
parsed ( expected to come from |
Either a single pubmed_record object, or a list of several
1 2 3 4 5 6 | hox_paper <- entrez_search(db="pubmed", term="10.1038/nature08789[doi]")
hox_rel <- entrez_link(db="pubmed", dbfrom="pubmed", id=hox_paper$ids)
recs <- entrez_fetch(db="pubmed",
id=hox_rel$links$pubmed_pubmed[1:3],
rettype="xml")
parse_pubmed_xml(recs)
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