tax_lineage: Lineage of a taxon
In ropensci/rotl: Interface to the 'Open Tree of Life' API
tax_lineage R Documentation
Lineage of a taxon
Description
Extract the lineage information (higher taxonomy) from an object
returned by taxonomy_taxon_info.
Usage
tax_lineage(tax, ...)
## S3 method for class 'taxon_info'
tax_lineage(tax, ...)
Arguments
tax
an object created by taxonomy_taxon_info
using the argument include_lineage=TRUE.
...
additional arguments (currently unused).
Details
The object passed to this function must have been created using
the argument include_lineage=TRUE.
Value
A list with one slot per taxon that contains a data frame
with 3 columns: the taxonomy rank, the name, and unique name
for all taxa included in the lineage of the taxon up to the
root of the tree.
ropensci/rotl documentation built on June 27, 2023, 4:55 p.m.
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| tax_lineage | R Documentation |
Lineage of a taxon
Description
Extract the lineage information (higher taxonomy) from an object
returned by taxonomy_taxon_info.
Usage
tax_lineage(tax, ...)
## S3 method for class 'taxon_info'
tax_lineage(tax, ...)
Arguments
tax |
an object created by |
... |
additional arguments (currently unused). |
Details
The object passed to this function must have been created using
the argument include_lineage=TRUE.
Value
A list with one slot per taxon that contains a data frame with 3 columns: the taxonomy rank, the name, and unique name for all taxa included in the lineage of the taxon up to the root of the tree.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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