get_study: return the trees in treebase that correspond to the search...

Description Usage Arguments Details Value

View source: R/download_metadata.R

Description

return the trees in treebase that correspond to the search results get_study is deprecated, and now can be performed more easily using phylo_metadata and oai_metadata search functions.

Usage

1
get_study(search_results, curl = getCurlHandle(), ...)

Arguments

search_results

the output of download_metadata, or a subset thereof

curl

the handle to the curl web utility for repeated calls, see the getCurlHandle() function in RCurl package for details.

...

additional arguments to pass to search_treebase

Details

this function is commonly used to get trees corresponding to the metadata search.

Value

all corresponding phylogenies.


ropensci/treebase documentation built on May 25, 2017, 2:40 p.m.