Files in rorynolan/detrendr
Detrend Images

.Rbuildignore
.gitignore
.travis.yml
CONDUCT.md
DESCRIPTION
LICENSE
NAMESPACE
NEWS.md R/RcppExports.R R/best_degree.R R/best_l.R R/best_swaps.R R/best_tau.R R/brightness.R R/class_constructors.R R/detrend.R R/detrendr.R R/dir_detrend.R R/frame_stats.R R/iterators.R R/myrs.R R/pillar_stats.R R/pillar_utils.R R/polynom.R R/row_col_stats.R R/smooth.R R/utils.R R/vec_stats.R README.Rmd README.md
README_files/figure-gfm/detrend-1.png
README_files/figure-gfm/visualize bleaching-1.png
README_files/figure-markdown_github/detrend-1.png
README_files/figure-markdown_github/visualize bleaching-1.png
_pkgdown.yml
appveyor.yml
codecov.yml
cran-comments.md
detrendr.Rproj
docs/CONDUCT.html
docs/LICENSE-text.html
docs/articles/batch-mode.html
docs/articles/index.html
docs/articles/single-images.html
docs/articles/single-images_files/figure-html/display-mean-1.png
docs/articles/single-images_files/figure-html/display-thresholded-mean-1.png
docs/articles/single-images_files/figure-html/plot-detrended-mean-profile-1.png
docs/articles/single-images_files/figure-html/plot-mean-profile-1.png
docs/authors.html
docs/docsearch.css
docs/docsearch.js
docs/favicon.ico
docs/index.html
docs/link.svg
docs/logo.png
docs/news/index.html
docs/pkgdown.css
docs/pkgdown.js
docs/pkgdown.yml
docs/reference/apply_on_pillars.html
docs/reference/best_degree.html
docs/reference/best_l.html
docs/reference/best_swaps.html
docs/reference/best_tau.html
docs/reference/brightness_pillars.html
docs/reference/detrend-directory.html
docs/reference/detrended_img.html
docs/reference/detrending.html
docs/reference/detrendr.html
docs/reference/figures/logo.png
docs/reference/index.html
docs/reference/mean_frames.html
docs/reference/pillar-stats.html
docs/reference/rfromboxes.html
docs/reference/rtoboxes.html
index.Rmd index.md
inst/CITATION
inst/WORDLIST
inst/extdata/2ch100frame.tif
inst/extdata/bleached.tif
junk/frame_stats.cc
junk/med_reflect.R
junk/med_reflect.cpp
junk/med_reflect.h
junk/med_reflect.o
junk/med_reflect_parallel.cpp
junk/med_reflect_parallel.o
junk/polynom.R
junk/polynom.h
junk/polynom_parallel.cc
junk/single-point.R
junk/single_point.cpp
junk/sticker.R
junk/sticker.png
junk/test-med_reflect.R man/apply_on_pillars.Rd man/best_degree.Rd man/best_l.Rd man/best_swaps.Rd man/best_tau.Rd man/brightness_pillars.Rd man/detrend-directory.Rd man/detrended_img.Rd man/detrending.Rd man/detrendr.Rd
man/figures/logo.png
man/mean_frames.Rd man/pillar-stats.Rd man/rfromboxes.Rd man/rtoboxes.Rd revdep/README.md
revdep/checks.noindex/libraries.csv
revdep/checks.noindex/nandb/nandb_1.0.1.tar.gz
revdep/checks.noindex/nandb/new/libraries.txt
revdep/checks.noindex/nandb/new/nandb.Rcheck/00check.log
revdep/checks.noindex/nandb/new/nandb.Rcheck/00install.out
revdep/checks.noindex/nandb/new/nandb.Rcheck/Rdlatex.log
revdep/checks.noindex/nandb/new/nandb.Rcheck/nandb-Ex.R
revdep/checks.noindex/nandb/new/nandb.Rcheck/nandb-Ex.Rout
revdep/checks.noindex/nandb/new/nandb.Rcheck/nandb-Ex.pdf
revdep/checks.noindex/nandb/new/nandb.Rcheck/nandb-manual.log
revdep/checks.noindex/nandb/new/nandb.Rcheck/nandb-manual.pdf
revdep/checks.noindex/nandb/new/nandb.Rcheck/tests/startup.Rs
revdep/checks.noindex/nandb/new/nandb.Rcheck/tests/testthat.R
revdep/checks.noindex/nandb/new/nandb.Rcheck/tests/testthat.Rout.fail
revdep/checks.noindex/nandb/new/nandb.Rcheck/tests/testthat/test-brightness.R revdep/checks.noindex/nandb/new/nandb.Rcheck/tests/testthat/test-cc_brightness.R revdep/checks.noindex/nandb/new/nandb.Rcheck/tests/testthat/test-cc_number.R revdep/checks.noindex/nandb/new/nandb.Rcheck/tests/testthat/test-class_constructors.R revdep/checks.noindex/nandb/new/nandb.Rcheck/tests/testthat/test-cross_var-examples.R revdep/checks.noindex/nandb/new/nandb.Rcheck/tests/testthat/test-filters.R revdep/checks.noindex/nandb/new/nandb.Rcheck/tests/testthat/test-number.R revdep/checks.noindex/nandb/new/nandb.Rcheck/tests/testthat/test-utils.R
revdep/checks.noindex/nandb/old/libraries.txt
revdep/checks.noindex/nandb/old/nandb.Rcheck/00check.log
revdep/checks.noindex/nandb/old/nandb.Rcheck/00install.out
revdep/checks.noindex/nandb/old/nandb.Rcheck/Rdlatex.log
revdep/checks.noindex/nandb/old/nandb.Rcheck/nandb-Ex.R
revdep/checks.noindex/nandb/old/nandb.Rcheck/nandb-Ex.Rout
revdep/checks.noindex/nandb/old/nandb.Rcheck/nandb-Ex.pdf
revdep/checks.noindex/nandb/old/nandb.Rcheck/nandb-manual.log
revdep/checks.noindex/nandb/old/nandb.Rcheck/nandb-manual.pdf
revdep/checks.noindex/nandb/old/nandb.Rcheck/tests/startup.Rs
revdep/checks.noindex/nandb/old/nandb.Rcheck/tests/testthat.R
revdep/checks.noindex/nandb/old/nandb.Rcheck/tests/testthat.Rout.fail
revdep/checks.noindex/nandb/old/nandb.Rcheck/tests/testthat/test-brightness.R revdep/checks.noindex/nandb/old/nandb.Rcheck/tests/testthat/test-cc_brightness.R revdep/checks.noindex/nandb/old/nandb.Rcheck/tests/testthat/test-cc_number.R revdep/checks.noindex/nandb/old/nandb.Rcheck/tests/testthat/test-class_constructors.R revdep/checks.noindex/nandb/old/nandb.Rcheck/tests/testthat/test-cross_var-examples.R revdep/checks.noindex/nandb/old/nandb.Rcheck/tests/testthat/test-filters.R revdep/checks.noindex/nandb/old/nandb.Rcheck/tests/testthat/test-number.R revdep/checks.noindex/nandb/old/nandb.Rcheck/tests/testthat/test-utils.R
revdep/data.sqlite
revdep/library.noindex/detrendr/old/detrendr/CITATION
revdep/library.noindex/detrendr/old/detrendr/DESCRIPTION
revdep/library.noindex/detrendr/old/detrendr/INDEX
revdep/library.noindex/detrendr/old/detrendr/LICENSE
revdep/library.noindex/detrendr/old/detrendr/Meta/Rd.rds
revdep/library.noindex/detrendr/old/detrendr/Meta/features.rds
revdep/library.noindex/detrendr/old/detrendr/Meta/hsearch.rds
revdep/library.noindex/detrendr/old/detrendr/Meta/links.rds
revdep/library.noindex/detrendr/old/detrendr/Meta/nsInfo.rds
revdep/library.noindex/detrendr/old/detrendr/Meta/package.rds
revdep/library.noindex/detrendr/old/detrendr/Meta/vignette.rds
revdep/library.noindex/detrendr/old/detrendr/NAMESPACE
revdep/library.noindex/detrendr/old/detrendr/NEWS.md
revdep/library.noindex/detrendr/old/detrendr/R/detrendr
revdep/library.noindex/detrendr/old/detrendr/R/detrendr.rdb
revdep/library.noindex/detrendr/old/detrendr/R/detrendr.rdx
revdep/library.noindex/detrendr/old/detrendr/doc/detrendr.R revdep/library.noindex/detrendr/old/detrendr/doc/detrendr.Rmd
revdep/library.noindex/detrendr/old/detrendr/doc/detrendr.html
revdep/library.noindex/detrendr/old/detrendr/doc/index.html
revdep/library.noindex/detrendr/old/detrendr/extdata/bleached.tif
revdep/library.noindex/detrendr/old/detrendr/help/AnIndex
revdep/library.noindex/detrendr/old/detrendr/help/aliases.rds
revdep/library.noindex/detrendr/old/detrendr/help/detrendr.rdb
revdep/library.noindex/detrendr/old/detrendr/help/detrendr.rdx
revdep/library.noindex/detrendr/old/detrendr/help/paths.rds
revdep/library.noindex/detrendr/old/detrendr/html/00Index.html
revdep/library.noindex/detrendr/old/detrendr/html/R.css
revdep/library.noindex/detrendr/old/detrendr/libs/detrendr.so
revdep/library.noindex/detrendr/old/detrendr/libs/detrendr.so.dSYM/Contents/Info.plist
revdep/library.noindex/detrendr/old/detrendr/libs/detrendr.so.dSYM/Contents/Resources/DWARF/detrendr.so
revdep/problems.md
src/.gitignore
src/Makevars
src/Makevars.win
src/RcppExports.cpp
src/anyNA.cpp
src/col_stats_parallel.cpp
src/frame_utils.cpp
src/pillar_stats.cpp
src/pillar_stats_parallel.cpp
src/pillar_utils.h
src/pillar_utils_parallel.cpp
src/pillar_utils_rcpp.h
src/rbernoulli_parallel.cpp
src/rboxes.cpp
src/rboxes.h
src/row_stats_parallel.cpp
src/rpois_parallel.cc
src/smooth.cc
src/smooth.h
src/smooth_parallel.cc
src/stats_parallel.cc
src/summary_stats.h
src/utils.cpp
tests/spelling.R tests/testthat.R tests/testthat/test-anyNA.R tests/testthat/test-best_params.R tests/testthat/test-brightness.R tests/testthat/test-class_constructors.R tests/testthat/test-col_stats.R tests/testthat/test-detrend.R tests/testthat/test-dir_detrend.R tests/testthat/test-frame_stats.R tests/testthat/test-iterators.R tests/testthat/test-myrs.R tests/testthat/test-pillar_stats.R tests/testthat/test-pillar_utils.R tests/testthat/test-polynom.R tests/testthat/test-smooth.R tests/testthat/test-utils.R
vignettes/.gitignore
vignettes/batch-mode.Rmd vignettes/single-images.Rmd
rorynolan/detrendr documentation built on Nov. 10, 2018, 9:53 p.m.