Man pages for royfrancis/drtracker
Track zebrafish larvae in assay plates
| assignWells | Takes xy data and assigns to wells for 24 or 48 well plate. |
| gridWells | Internal: Computes plate layout and wells from marked data. |
| linkFrames | Takes xy data with wells and links spots frame to frame. |
| ltrack | Track larval movement in 24 or 48 well assay plates. |
| spotAlphahull | Computes alphahull (concave hull) of xy spot data. |
| spotCoverage | Computes coverage (convex hull) of xy spot data. |
| spotDensity | Computes 2D kernal density of xy spot data. |
| spotMsd | Computes minimum spanning distance of xy spot data. |
| spotRatio | Computes larval presence in center vs edges of the wells. |
| trackFeatures | Computes features for tracks such as distance, speed etc. |
