SNR: Signal to noise ratio estimated from the CRLMM algorithm.

In rscharpf/crlmmCompendium: This package contains the compendium for copy number estimation with the crlmm package

Description

The signal to noise ratio (SNR) is an overall measure of the separation of the genotype clusters for a particular sample. The SNR can be useful as a measure of quality control. For Affymetrix 6.0, we generally suggest dropping samples with a SNR below 5.

Usage

data(SNR)

Format

The format is: num [1:1258] 6.6 7.05 7.83 7.35 6.47 ...

Source

HapMap phase III

Examples

data(SNR)
## Not run: 
	##for an object of class \code{CNSet}, the SNR can be extracted by
	object$SNR[]

## End(Not run)

rscharpf/crlmmCompendium documentation built on May 28, 2019, 3:31 a.m.