densplot: Plot PDF curve of given type and variable for single density...

In rsh249/cRacle: Climate Reconstruction Analysis using Coexistence Likelihood Estimation

Description

Using an object from the densform() function. Plot a single PDF curve in a new plot window.

Usage

densplot(
  dens.ob,
  var,
  col = sample(grDevices::colours()),
  type = ".kde",
  w = FALSE
)

Arguments

dens.ob	An object derived from the cRacle::dens_ob() function.
var	A character string that matches one of the layer names in the source raster object.
col	A color declaration. Default is a random color.
type	A character string of value either ".kde" for a Kernel Density Estimator curve, or ".gauss" for a Gaussian (normal) curve. All other values will result in errors.
w	TRUE or FALSE to show weighted probability functions

Examples

## Not run: 
#distr <- read.table('test_mat.txt', head=T, sep ="\t");
#OR:
data(distr); data(climondbioclim);
extr.raw = extraction(data=distr, clim= climondbioclim, schema='raw');
extr.sub = subset(extr.raw, extr.raw$tax == extr.raw[5,'tax']);
dens.sub = densform(extr.sub, clim = climondbioclim, bw = 'nrd0', n = 512);
densplot(dens.sub, names(climondbioclim[[1]]));

## End(Not run)

rsh249/cRacle documentation built on Feb. 2, 2022, 2:01 p.m.